EnhancerDB
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  3. rs6425232[chr1:173392146]
Enhancers that have rs6425232[chr1:173392146]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
chr1 173392092 173392451 vista3948
VISTA
Transcript factors that have rs6425232[chr1:173392146]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173391989 173392253 ZNF274 GTRD no Bone Marrow (K562) 21351338
chr1 173391989 173392253 ZNF274 GTRD no Bone Marrow (K562) 107846729
chr1 173392133 173392152 PAX5 JASPAR yes 33198481
chr1 173392133 173392152 PAX5 JASPAR yes 118401741
chr1 173392144 173392153 THAP1 JASPAR yes 33198482
chr1 173392144 173392153 THAP1 JASPAR yes 118401742
Genes associated with rs6425232[chr1:173392146], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More