EnhancerDB
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  3. rs556894414[chr1:173392193]
Enhancers that have rs556894414[chr1:173392193]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
chr1 173392092 173392451 vista3948
VISTA
Transcript factors that have rs556894414[chr1:173392193]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173391989 173392253 ZNF274 GTRD no Bone Marrow (K562) 21351338
chr1 173391989 173392253 ZNF274 GTRD no Bone Marrow (K562) 107846729
chr1 173392178 173392199 ZNF263 JASPAR yes 33198483
chr1 173392178 173392199 ZNF263 JASPAR yes 118401743
chr1 173392185 173392197 HINFP JASPAR yes 33198484
chr1 173392185 173392197 HINFP JASPAR yes 118401744
chr1 173392189 173392197 SP1 TRANSFAC yes 33198485
chr1 173392189 173392197 SP1 TRANSFAC yes 118401745
chr1 173392189 173392199 SP1 JASPAR yes 33198486
chr1 173392189 173392199 SP1 JASPAR yes 118401746
Genes associated with rs556894414[chr1:173392193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More