EnhancerDB
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  3. vista40088[chr3:15341871-15342528]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40088[chr3:15341871-15342528]
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Tissue distribution of vista40088
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Transcription factor that possibly regulate vista40088[chr3:15341871-15342528]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 15341928 15342207 SPI1 UCSC Txn Factor no Conserved 108528366
chr3 15342033 15342494 GATA2 UCSC Txn Factor no Conserved 108528367
chr3 15342158 15342614 JUND UCSC Txn Factor no Conserved 108528368
chr3 15342259 15342583 FOS UCSC Txn Factor no Conserved 108528369
chr3 15342272 15342612 JUN UCSC Txn Factor no Conserved 108528370
chr3 15342317 15342540 FOSL2 UCSC Txn Factor no Conserved 108528371
chr3 15341888 15341899 EBF1 JASPAR yes 653219
chr3 15341888 15341899 EBF1 JASPAR yes 70943493
chr3 15341892 15341897 TFAP2A TRANSFAC yes 653220
chr3 15341892 15341897 TFAP2A TRANSFAC yes 70943494
chr3 15341892 15341898 MZF1 JASPAR yes 653221
chr3 15341892 15341898 MZF1 JASPAR yes 70943495
chr3 15341908 15341919 FOSL1 JASPAR yes 653222
chr3 15341908 15341919 FOSL1 JASPAR yes 70943496
chr3 15341910 15341921 BATF JASPAR yes 653223
chr3 15341910 15341921 BATF JASPAR yes 70943497
chr3 15341923 15341928 ETS2 TRANSFAC yes 653224
chr3 15341923 15341928 ETS2 TRANSFAC yes 70943498
chr3 15341932 15341936 NFE TRANSFAC yes 653225
chr3 15341932 15341936 NFE TRANSFAC yes 70943499
chr3 15341932 15341937 GATA1 TRANSFAC yes 653226
chr3 15341932 15341937 GATA1 TRANSFAC yes 70943500
chr3 15341932 15341938 GATA3 JASPAR yes 653227
chr3 15341932 15341938 GATA3 JASPAR yes 70943501
chr3 15341957 15341961 YY1 TRANSFAC yes 653228
chr3 15341957 15341961 YY1 TRANSFAC yes 70943502
chr3 15341974 15341977 MYB TRANSFAC yes 653229
chr3 15341974 15341977 MYB TRANSFAC yes 70943503
chr3 15341985 15341991 LEF1 TRANSFAC yes 653230
chr3 15341985 15341991 SOX10 JASPAR yes 653231
chr3 15341985 15341991 LEF1 TRANSFAC yes 70943504
chr3 15341985 15341991 SOX10 JASPAR yes 70943505
chr3 15341985 15342000 FOXA1 JASPAR yes 653232
chr3 15341985 15342000 FOXA1 JASPAR yes 70943506
chr3 15341986 15341997 FOXB1 JASPAR yes 653233
chr3 15341986 15341997 FOXC1 JASPAR yes 653234
chr3 15341986 15341997 FOXB1 JASPAR yes 70943507
chr3 15341986 15341997 FOXC1 JASPAR yes 70943508
chr3 15341986 15341998 FOXC2 JASPAR yes 653235
chr3 15341986 15341998 FOXC2 JASPAR yes 70943509
chr3 15341991 15342012 IRF1 JASPAR yes 653236
chr3 15341991 15342012 IRF1 JASPAR yes 70943510
chr3 15341994 15341998 TEAD2 TRANSFAC yes 653237
chr3 15341994 15341998 TEAD2 TRANSFAC yes 70943511
chr3 15341994 15341999 TBP TRANSFAC yes 653238
chr3 15341994 15341999 TBP TRANSFAC yes 70943512
chr3 15341994 15342000 TFIID TRANSFAC yes 653239
chr3 15341994 15342000 TFIID TRANSFAC yes 70943513
chr3 15341995 15342009 SPI1 JASPAR yes 653240
chr3 15341995 15342009 SPI1 JASPAR yes 70943514
chr3 15341996 15342009 ELF1 JASPAR yes 653241
chr3 15341996 15342009 ELF1 JASPAR yes 70943515
chr3 15341999 15342010 FLI1 JASPAR yes 653242
chr3 15341999 15342010 FLI1 JASPAR yes 70943516
chr3 15341999 15342020 ZNF263 JASPAR yes 653243
chr3 15341999 15342020 ZNF263 JASPAR yes 70943517
chr3 15342000 15342005 ETS2 TRANSFAC yes 653244
chr3 15342000 15342005 ETS2 TRANSFAC yes 70943518
chr3 15342000 15342021 ZNF263 JASPAR yes 653245
chr3 15342000 15342021 ZNF263 JASPAR yes 70943519
chr3 15342002 15342012 SP1 JASPAR yes 653246
chr3 15342002 15342012 SP1 JASPAR yes 70943520
chr3 15342006 15342014 SP1 TRANSFAC yes 653247
chr3 15342006 15342014 WT1 TRANSFAC yes 653248
chr3 15342006 15342014 SP1 TRANSFAC yes 70943521
chr3 15342006 15342014 WT1 TRANSFAC yes 70943522
chr3 15342008 15342015 SP1 TRANSFAC yes 653249
chr3 15342008 15342015 SP1 TRANSFAC yes 70943523
chr3 15342008 15342018 SP1 JASPAR yes 653250
chr3 15342008 15342018 SP1 JASPAR yes 70943524
chr3 15342008 15342029 ZNF263 JASPAR yes 653251
chr3 15342008 15342029 ZNF263 JASPAR yes 70943525
chr3 15342009 15342017 SP1 TRANSFAC yes 653252
chr3 15342009 15342017 SP1 TRANSFAC yes 70943526
chr3 15342010 15342015 SP1 TRANSFAC yes 653253
chr3 15342010 15342015 SP1 TRANSFAC yes 70943527
chr3 15342011 15342016 SP1 TRANSFAC yes 653254
chr3 15342011 15342016 SP1 TRANSFAC yes 70943528
chr3 15342011 15342017 SP1 TRANSFAC yes 653255
chr3 15342011 15342017 SP1 TRANSFAC yes 70943529
chr3 15342015 15342036 ZNF263 JASPAR yes 653256
chr3 15342015 15342036 ZNF263 JASPAR yes 70943530
chr3 15342019 15342033 SPI1 JASPAR yes 653257
chr3 15342019 15342033 SPIC JASPAR yes 653258
chr3 15342019 15342033 SPI1 JASPAR yes 70943531
chr3 15342019 15342033 SPIC JASPAR yes 70943532
chr3 15342023 15342030 SPIB JASPAR yes 653259
chr3 15342023 15342030 SPIB JASPAR yes 70943533
chr3 15342025 15342040 FOXP1 JASPAR yes 653260
chr3 15342025 15342040 FOXP1 JASPAR yes 70943534
chr3 15342026 15342047 IRF1 JASPAR yes 653261
chr3 15342026 15342047 IRF1 JASPAR yes 70943535
chr3 15342028 15342039 FOXP2 JASPAR yes 653262
chr3 15342028 15342039 FOXP2 JASPAR yes 70943536
chr3 15342030 15342044 SPI1 JASPAR yes 653263
chr3 15342030 15342044 SPIC JASPAR yes 653264
chr3 15342030 15342044 SPI1 JASPAR yes 70943537
chr3 15342030 15342044 SPIC JASPAR yes 70943538
chr3 15342031 15342044 ELF1 JASPAR yes 653265
chr3 15342031 15342044 ELF1 JASPAR yes 70943539
chr3 15342032 15342044 EHF JASPAR yes 653266
chr3 15342032 15342044 ELF1 JASPAR yes 653267
chr3 15342032 15342044 ELF4 JASPAR yes 653268
chr3 15342032 15342044 EHF JASPAR yes 70943540
chr3 15342032 15342044 ELF1 JASPAR yes 70943541
chr3 15342032 15342044 ELF4 JASPAR yes 70943542
chr3 15342032 15342045 ELF3 JASPAR yes 653269
chr3 15342032 15342045 ELF3 JASPAR yes 70943543
chr3 15342033 15342044 ELF5 JASPAR yes 653270
chr3 15342033 15342044 ETV2 JASPAR yes 653271
chr3 15342033 15342044 ELF5 JASPAR yes 70943544
chr3 15342033 15342044 ETV2 JASPAR yes 70943545
chr3 15342034 15342044 ERF JASPAR yes 653272
chr3 15342034 15342044 ERG JASPAR yes 653273
chr3 15342034 15342044 ETS1 JASPAR yes 653274
chr3 15342034 15342044 ETV3 JASPAR yes 653275
chr3 15342034 15342044 FEV JASPAR yes 653276
chr3 15342034 15342044 FLI1 JASPAR yes 653277
chr3 15342034 15342044 GABPA JASPAR yes 653278
chr3 15342034 15342044 ERF JASPAR yes 70943546
chr3 15342034 15342044 ERG JASPAR yes 70943547
chr3 15342034 15342044 ETS1 JASPAR yes 70943548
chr3 15342034 15342044 ETV3 JASPAR yes 70943549
chr3 15342034 15342044 FEV JASPAR yes 70943550
chr3 15342034 15342044 FLI1 JASPAR yes 70943551
chr3 15342034 15342044 GABPA JASPAR yes 70943552
chr3 15342034 15342045 ELK4 JASPAR yes 653279
chr3 15342034 15342045 FLI1 JASPAR yes 653280
chr3 15342034 15342045 ELK4 JASPAR yes 70943553
chr3 15342034 15342045 FLI1 JASPAR yes 70943554
chr3 15342035 15342043 EHF JASPAR yes 653281
chr3 15342035 15342043 FEV JASPAR yes 653282
chr3 15342035 15342043 EHF JASPAR yes 70943555
chr3 15342035 15342043 FEV JASPAR yes 70943556
chr3 15342036 15342043 SPI1 JASPAR yes 653283
chr3 15342036 15342043 SPI1 JASPAR yes 70943557
chr3 15342041 15342060 PAX5 JASPAR yes 653284
chr3 15342041 15342060 PAX5 JASPAR yes 70943558
chr3 15342046 15342056 NFIA JASPAR yes 653285
chr3 15342046 15342056 NFIA JASPAR yes 70943559
chr3 15342048 15342054 NFIC JASPAR yes 653286
chr3 15342048 15342054 NFIC JASPAR yes 70943560
chr3 15342050 15342065 HSF1 JASPAR yes 653287
chr3 15342050 15342065 HSF1 JASPAR yes 70943561
chr3 15342052 15342065 ZBTB18 JASPAR yes 653288
chr3 15342052 15342065 ZBTB18 JASPAR yes 70943562
chr3 15342074 15342084 ZNF740 JASPAR yes 653289
chr3 15342074 15342084 ZNF740 JASPAR yes 70943563
chr3 15342087 15342095 EHF JASPAR yes 653290
chr3 15342087 15342095 EHF JASPAR yes 70943564
chr3 15342089 15342104 PRDM1 JASPAR yes 653291
chr3 15342089 15342104 PRDM1 JASPAR yes 70943565
chr3 15342091 15342109 RARA JASPAR yes 653292
chr3 15342091 15342109 RARA JASPAR yes 70943566
chr3 15342097 15342104 SPIB JASPAR yes 653293
chr3 15342097 15342104 SPIB JASPAR yes 70943567
chr3 15342111 15342123 FOXI1 JASPAR yes 653294
chr3 15342111 15342123 FOXI1 JASPAR yes 70943568
chr3 15342146 15342160 GLIS3 JASPAR yes 653295
chr3 15342146 15342160 GLIS3 JASPAR yes 70943569
chr3 15342161 15342173 PKNOX1 JASPAR yes 653296
chr3 15342161 15342173 TGIF2 JASPAR yes 653297
chr3 15342161 15342173 PKNOX1 JASPAR yes 70943570
chr3 15342161 15342173 TGIF2 JASPAR yes 70943571
chr3 15342168 15342180 PKNOX1 JASPAR yes 653298
chr3 15342168 15342180 PKNOX2 JASPAR yes 653299
chr3 15342168 15342180 TGIF1 JASPAR yes 653300
chr3 15342168 15342180 TGIF2 JASPAR yes 653301
chr3 15342168 15342180 PKNOX1 JASPAR yes 70943572
chr3 15342168 15342180 PKNOX2 JASPAR yes 70943573
chr3 15342168 15342180 TGIF1 JASPAR yes 70943574
chr3 15342168 15342180 TGIF2 JASPAR yes 70943575
chr3 15342188 15342202 TCF7L2 JASPAR yes 653302
chr3 15342188 15342202 TCF7L2 JASPAR yes 70943576
chr3 15342202 15342217 HSF1 JASPAR yes 653303
chr3 15342202 15342217 HSF1 JASPAR yes 70943577
chr3 15342203 15342216 HSF4 JASPAR yes 653304
chr3 15342203 15342216 HSF4 JASPAR yes 70943578
chr3 15342209 15342214 ETS2 TRANSFAC yes 653305
chr3 15342209 15342214 ETS2 TRANSFAC yes 70943579
chr3 15342220 15342238 NFYA JASPAR yes 653306
chr3 15342220 15342238 NFYA JASPAR yes 70943580
chr3 15342231 15342235 H4TF2 TRANSFAC yes 653307
chr3 15342231 15342235 H4TF2 TRANSFAC yes 70943581
chr3 15342231 15342245 EBF1 JASPAR yes 653308
chr3 15342231 15342245 EBF1 JASPAR yes 70943582
chr3 15342232 15342243 EBF1 JASPAR yes 653309
chr3 15342232 15342243 EBF1 JASPAR yes 70943583
chr3 15342233 15342244 EBF1 JASPAR yes 653310
chr3 15342233 15342244 EBF1 JASPAR yes 70943584
chr3 15342241 15342262 ZNF263 JASPAR yes 653311
chr3 15342241 15342262 ZNF263 JASPAR yes 70943585
chr3 15342244 15342254 MZF1 JASPAR yes 653312
chr3 15342244 15342254 MZF1 JASPAR yes 70943586
chr3 15342271 15342274 MYB TRANSFAC yes 653313
chr3 15342271 15342274 MYB TRANSFAC yes 70943587
chr3 15342274 15342295 ZNF263 JASPAR yes 653314
chr3 15342274 15342295 ZNF263 JASPAR yes 70943588
chr3 15342281 15342302 ZNF263 JASPAR yes 653315
chr3 15342281 15342302 ZNF263 JASPAR yes 70943589
chr3 15342288 15342299 FLI1 JASPAR yes 653316
chr3 15342288 15342299 FLI1 JASPAR yes 70943590
chr3 15342297 15342306 ZEB1 JASPAR yes 653317
chr3 15342297 15342306 ZEB1 JASPAR yes 70943591
chr3 15342298 15342308 TCF3 JASPAR yes 653318
chr3 15342298 15342308 TCF4 JASPAR yes 653319
chr3 15342298 15342308 TCF3 JASPAR yes 70943592
chr3 15342298 15342308 TCF4 JASPAR yes 70943593
chr3 15342299 15342308 SNAI2 JASPAR yes 653320
chr3 15342299 15342308 SNAI2 JASPAR yes 70943594
chr3 15342300 15342305 USF2 TRANSFAC yes 653321
chr3 15342300 15342305 USF2 TRANSFAC yes 70943595
chr3 15342310 15342315 ETS2 TRANSFAC yes 653322
chr3 15342310 15342315 ETS2 TRANSFAC yes 70943596
chr3 15342310 15342318 EHF JASPAR yes 653323
chr3 15342310 15342318 EHF JASPAR yes 70943597
chr3 15342318 15342335 RXRA JASPAR yes 653324
chr3 15342318 15342335 RXRA JASPAR yes 70943598
chr3 15342326 15342332 MAZ TRANSFAC yes 653325
chr3 15342326 15342332 MAZ TRANSFAC yes 70943599
chr3 15342385 15342393 BSX JASPAR yes 653326
chr3 15342385 15342393 BSX JASPAR yes 70943600
chr3 15342387 15342391 YY1 TRANSFAC yes 653327
chr3 15342387 15342391 YY1 TRANSFAC yes 70943601
chr3 15342390 15342404 JUN JASPAR yes 653328
chr3 15342390 15342404 JUN JASPAR yes 70943602
chr3 15342393 15342404 FOSL2 JASPAR yes 653329
chr3 15342393 15342404 JUNB JASPAR yes 653330
chr3 15342393 15342404 FOSL2 JASPAR yes 70943603
chr3 15342393 15342404 JUNB JASPAR yes 70943604
chr3 15342394 15342405 FOS JASPAR yes 653331
chr3 15342394 15342405 FOSL1 JASPAR yes 653332
chr3 15342394 15342405 JUND JASPAR yes 653333
chr3 15342394 15342405 NFE2 JASPAR yes 653334
chr3 15342394 15342405 FOS JASPAR yes 70943605
chr3 15342394 15342405 FOSL1 JASPAR yes 70943606
chr3 15342394 15342405 JUND JASPAR yes 70943607
chr3 15342394 15342405 NFE2 JASPAR yes 70943608
chr3 15342395 15342402 JUN TRANSFAC yes 653335
chr3 15342395 15342402 JUN TRANSFAC yes 70943609
chr3 15342395 15342404 JDP2 JASPAR yes 653336
chr3 15342395 15342404 JDP2 JASPAR yes 70943610
chr3 15342395 15342406 FOSL2 JASPAR yes 653337
chr3 15342395 15342406 JUNB JASPAR yes 653338
chr3 15342395 15342406 FOSL2 JASPAR yes 70943611
chr3 15342395 15342406 JUNB JASPAR yes 70943612
chr3 15342395 15342409 JUN JASPAR yes 653339
chr3 15342395 15342409 JUN JASPAR yes 70943613
chr3 15342400 15342411 BATF JASPAR yes 653340
chr3 15342400 15342411 BATF JASPAR yes 70943614
chr3 15342407 15342413 MZF1 JASPAR yes 653341
chr3 15342407 15342413 MZF1 JASPAR yes 70943615
chr3 15342416 15342425 HIC2 JASPAR yes 653342
chr3 15342416 15342425 HIC2 JASPAR yes 70943616
chr3 15342419 15342423 LFA1 TRANSFAC yes 653343
chr3 15342419 15342423 LFA1 TRANSFAC yes 70943617
chr3 15342435 15342449 JUN JASPAR yes 653344
chr3 15342435 15342449 JUN JASPAR yes 70943618
chr3 15342438 15342449 FOSL2 JASPAR yes 653345
chr3 15342438 15342449 JUNB JASPAR yes 653346
chr3 15342438 15342449 FOSL2 JASPAR yes 70943619
chr3 15342438 15342449 JUNB JASPAR yes 70943620
chr3 15342439 15342450 FOS JASPAR yes 653347
chr3 15342439 15342450 FOSL1 JASPAR yes 653348
chr3 15342439 15342450 JUND JASPAR yes 653349
chr3 15342439 15342450 NFE2 JASPAR yes 653350
chr3 15342439 15342450 FOS JASPAR yes 70943621
chr3 15342439 15342450 FOSL1 JASPAR yes 70943622
chr3 15342439 15342450 JUND JASPAR yes 70943623
chr3 15342439 15342450 NFE2 JASPAR yes 70943624
chr3 15342440 15342449 JDP2 JASPAR yes 653351
chr3 15342440 15342449 JDP2 JASPAR yes 70943625
chr3 15342440 15342451 JUNB JASPAR yes 653352
chr3 15342440 15342451 JUNB JASPAR yes 70943626
chr3 15342440 15342454 JUN JASPAR yes 653353
chr3 15342440 15342454 JUN JASPAR yes 70943627
chr3 15342441 15342452 BATF JASPAR yes 653354
chr3 15342441 15342452 BATF JASPAR yes 70943628
chr3 15342453 15342462 THAP1 JASPAR yes 653355
chr3 15342453 15342462 THAP1 JASPAR yes 70943629
chr3 15342467 15342475 HOXA5 JASPAR yes 653356
chr3 15342467 15342475 HOXA5 JASPAR yes 70943630
chr3 15342469 15342477 DLX6 JASPAR yes 653357
chr3 15342469 15342477 MSX1 JASPAR yes 653358
chr3 15342469 15342477 DLX6 JASPAR yes 70943631
chr3 15342469 15342477 MSX1 JASPAR yes 70943632
chr3 15342471 15342489 RARA JASPAR yes 653359
chr3 15342471 15342489 RARA JASPAR yes 70943633
chr3 15342497 15342518 ZNF263 JASPAR yes 653360
chr3 15342497 15342518 ZNF263 JASPAR yes 70943634
chr3 15342501 15342522 ZNF263 JASPAR yes 653361
chr3 15342501 15342522 ZNF263 JASPAR yes 70943635
chr3 15342504 15342525 ZNF263 JASPAR yes 653362
chr3 15342504 15342525 ZNF263 JASPAR yes 70943636
chr3 15342522 15342538 ZNF143 JASPAR yes 653363
chr3 15342522 15342538 ZNF143 JASPAR yes 70943637
SNP sites on vista40088[chr3:15341871-15342528]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 15341932 rs6777366 G A
GATA1 GATA3 NFE SPI1
6574441
chr3 15341938 rs555754406 T C
GATA3 SPI1
6574442
chr3 15342009 rs201018481 GGGGGC G
ELF1 FLI1 IRF1 SP1 SPI1 WT1 ZNF263
6574443
chr3 15342010 rs138370317 GGGGC G
FLI1 IRF1 SP1 SPI1 WT1 ZNF263
6574444
chr3 15342010 rs372102206 GGGGC G
FLI1 IRF1 SP1 SPI1 WT1 ZNF263
6574445
chr3 15342011 rs200057553 GGGC G
IRF1 SP1 SPI1 WT1 ZNF263
6574446
chr3 15342011 rs371966636 GGGC G
IRF1 SP1 SPI1 WT1 ZNF263
6574447
chr3 15342012 rs557300212 GGC G
IRF1 SP1 SPI1 WT1 ZNF263
6574448
chr3 15342300 rs547156843 C T
FOS GATA2 JUN JUND SNAI2 TCF3 TCF4 USF2 ZEB1 ZNF263
6574449
chr3 15342332 rs151329629 G A
FOS FOSL2 GATA2 JUN JUND MAZ RXRA
6574450
chr3 15342403 rs60327453 A G
BATF FOS FOSL1 FOSL2 GATA2 JDP2 JUN JUNB JUND NFE2
6574451
chr3 15342440 rs78915303 G A
FOS FOSL1 FOSL2 GATA2 JDP2 JUN JUNB JUND NFE2
6574452
Genes possibly regulated by vista40088[chr3:15341871-15342528]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 15247659 15294425 + CAPN7 ENSG00000131375.5 15247659 0.66 0.99 3441 5788
chr3 15296360 15382875 - SH3BP5 ENSG00000131370.11 15382875 0.69 0.99 3442 59653
Expression level of Genes
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miRNAs possibly regulated by vista40088[chr3:15341871-15342528]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results