EnhancerDB
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  3. rs555754406[chr3:15341938]
Enhancers that have rs555754406[chr3:15341938]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 15321725 15344764 enh20375
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Prostate (RWPE1) Heart
chr3 15341871 15342528 vista40088
VISTA
Transcript factors that have rs555754406[chr3:15341938]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 15341928 15342207 SPI1 UCSC Txn Factor no Conserved 108528366
chr3 15341932 15341938 GATA3 JASPAR yes 653227
chr3 15341932 15341938 GATA3 JASPAR yes 70943501
Genes associated with rs555754406[chr3:15341938], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More