EnhancerDB
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  3. rs200057553[chr3:15342011]
Enhancers that have rs200057553[chr3:15342011]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 15321725 15344764 enh20375
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Prostate (RWPE1) Heart
chr3 15341871 15342528 vista40088
VISTA
Transcript factors that have rs200057553[chr3:15342011]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 15341928 15342207 SPI1 UCSC Txn Factor no Conserved 108528366
chr3 15341991 15342012 IRF1 JASPAR yes 653236
chr3 15341991 15342012 IRF1 JASPAR yes 70943510
chr3 15341999 15342020 ZNF263 JASPAR yes 653243
chr3 15341999 15342020 ZNF263 JASPAR yes 70943517
chr3 15342000 15342021 ZNF263 JASPAR yes 653245
chr3 15342000 15342021 ZNF263 JASPAR yes 70943519
chr3 15342002 15342012 SP1 JASPAR yes 653246
chr3 15342002 15342012 SP1 JASPAR yes 70943520
chr3 15342006 15342014 SP1 TRANSFAC yes 653247
chr3 15342006 15342014 WT1 TRANSFAC yes 653248
chr3 15342006 15342014 SP1 TRANSFAC yes 70943521
chr3 15342006 15342014 WT1 TRANSFAC yes 70943522
chr3 15342008 15342015 SP1 TRANSFAC yes 653249
chr3 15342008 15342015 SP1 TRANSFAC yes 70943523
chr3 15342008 15342018 SP1 JASPAR yes 653250
chr3 15342008 15342018 SP1 JASPAR yes 70943524
chr3 15342008 15342029 ZNF263 JASPAR yes 653251
chr3 15342008 15342029 ZNF263 JASPAR yes 70943525
chr3 15342009 15342017 SP1 TRANSFAC yes 653252
chr3 15342009 15342017 SP1 TRANSFAC yes 70943526
chr3 15342010 15342015 SP1 TRANSFAC yes 653253
chr3 15342010 15342015 SP1 TRANSFAC yes 70943527
chr3 15342011 15342016 SP1 TRANSFAC yes 653254
chr3 15342011 15342016 SP1 TRANSFAC yes 70943528
chr3 15342011 15342017 SP1 TRANSFAC yes 653255
chr3 15342011 15342017 SP1 TRANSFAC yes 70943529
Genes associated with rs200057553[chr3:15342011], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More