EnhancerDB
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  3. vista4046[chr1:178995927-178996290]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4046[chr1:178995927-178996290]
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Tissue distribution of vista4046
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Transcription factor that possibly regulate vista4046[chr1:178995927-178996290]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 178994606 178996177 POLR2A UCSC Txn Factor no Conserved 107847494
chr1 178995008 178995962 PHF8 UCSC Txn Factor no Conserved 107847495
chr1 178995090 178996049 E2F1 UCSC Txn Factor no Conserved 107847497
chr1 178995140 178995931 MAX UCSC Txn Factor no Conserved 107847498
chr1 178995283 178995942 MYC UCSC Txn Factor no Conserved 107847500
chr1 178995815 178996393 GATA2 UCSC Txn Factor no Conserved 107847521
chr1 178995958 178995973 RUNX2 JASPAR yes 33461326
chr1 178995958 178995973 RUNX2 JASPAR yes 118405818
chr1 178995971 178995985 GATA2 JASPAR yes 33461327
chr1 178995971 178995985 GATA2 JASPAR yes 118405819
chr1 178995973 178995979 GATA1 TRANSFAC yes 33461328
chr1 178995973 178995979 GATA1 TRANSFAC yes 118405820
chr1 178995973 178995981 GATA5 JASPAR yes 33461329
chr1 178995973 178995981 GATA5 JASPAR yes 118405821
chr1 178995995 178996007 TGIF1 JASPAR yes 33461330
chr1 178995995 178996007 TGIF1 JASPAR yes 118405822
chr1 178996005 178996008 MYB TRANSFAC yes 33461331
chr1 178996005 178996008 MYB TRANSFAC yes 118405823
chr1 178996021 178996026 GATA2 JASPAR yes 33461332
chr1 178996021 178996026 GATA2 JASPAR yes 118405824
chr1 178996026 178996047 ZNF263 JASPAR yes 33461333
chr1 178996026 178996047 ZNF263 JASPAR yes 118405825
chr1 178996029 178996050 ZNF263 JASPAR yes 33461334
chr1 178996029 178996050 ZNF263 JASPAR yes 118405826
chr1 178996041 178996062 ZNF263 JASPAR yes 33461335
chr1 178996041 178996062 ZNF263 JASPAR yes 118405827
chr1 178996049 178996054 NFY TRANSFAC yes 33461336
chr1 178996049 178996054 NFY TRANSFAC yes 118405828
chr1 178996049 178996063 E2F7 JASPAR yes 33461337
chr1 178996049 178996063 E2F7 JASPAR yes 118405829
chr1 178996050 178996062 E2F8 JASPAR yes 33461338
chr1 178996050 178996062 E2F8 JASPAR yes 118405830
chr1 178996051 178996066 PRDM1 JASPAR yes 33461339
chr1 178996051 178996066 PRDM1 JASPAR yes 118405831
chr1 178996052 178996063 E2F6 JASPAR yes 33461340
chr1 178996052 178996063 E2F6 JASPAR yes 118405832
chr1 178996062 178996072 MZF1 JASPAR yes 33461341
chr1 178996062 178996072 MZF1 JASPAR yes 118405833
chr1 178996069 178996072 MYB TRANSFAC yes 33461342
chr1 178996069 178996072 MYB TRANSFAC yes 118405834
chr1 178996089 178996100 DUX4 JASPAR yes 33461343
chr1 178996089 178996100 PHOX2A JASPAR yes 33461344
chr1 178996089 178996100 PROP1 JASPAR yes 33461345
chr1 178996089 178996100 DUX4 JASPAR yes 118405835
chr1 178996089 178996100 PHOX2A JASPAR yes 118405836
chr1 178996089 178996100 PROP1 JASPAR yes 118405837
chr1 178996115 178996132 ZNF410 JASPAR yes 33461346
chr1 178996115 178996132 ZNF410 JASPAR yes 118405838
chr1 178996134 178996139 GATA2 JASPAR yes 33461347
chr1 178996134 178996139 GATA2 JASPAR yes 118405839
chr1 178996144 178996159 MEF2A JASPAR yes 33461348
chr1 178996144 178996159 MEF2A JASPAR yes 118405840
chr1 178996145 178996160 MEF2C JASPAR yes 33461349
chr1 178996145 178996160 MEF2C JASPAR yes 118405841
chr1 178996151 178996172 IRF1 JASPAR yes 33461350
chr1 178996151 178996172 IRF1 JASPAR yes 118405842
chr1 178996155 178996169 STAT1 JASPAR yes 33461351
chr1 178996155 178996169 STAT1 JASPAR yes 118405843
chr1 178996155 178996170 PRDM1 JASPAR yes 33461352
chr1 178996155 178996170 STAT2 JASPAR yes 33461353
chr1 178996155 178996170 PRDM1 JASPAR yes 118405844
chr1 178996155 178996170 STAT2 JASPAR yes 118405845
chr1 178996155 178996173 IRF2 JASPAR yes 33461354
chr1 178996155 178996173 IRF2 JASPAR yes 118405846
chr1 178996174 178996187 ZBED1 JASPAR yes 33461355
chr1 178996174 178996187 ZBED1 JASPAR yes 118405847
chr1 178996194 178996206 PKNOX1 JASPAR yes 33461356
chr1 178996194 178996206 PKNOX2 JASPAR yes 33461357
chr1 178996194 178996206 PKNOX1 JASPAR yes 118405848
chr1 178996194 178996206 PKNOX2 JASPAR yes 118405849
chr1 178996212 178996218 MZF1 JASPAR yes 33461358
chr1 178996212 178996218 MZF1 JASPAR yes 118405850
chr1 178996225 178996244 CTCF JASPAR yes 33461359
chr1 178996225 178996244 CTCF JASPAR yes 118405851
chr1 178996239 178996251 IRF1 JASPAR yes 33461360
chr1 178996239 178996251 IRF1 JASPAR yes 118405852
chr1 178996244 178996249 H4TF1 TRANSFAC yes 33461361
chr1 178996244 178996249 H4TF1 TRANSFAC yes 118405853
chr1 178996246 178996256 TBR1 JASPAR yes 33461362
chr1 178996246 178996256 TBR1 JASPAR yes 118405854
chr1 178996260 178996265 ETS2 TRANSFAC yes 33461363
chr1 178996260 178996265 ETS2 TRANSFAC yes 118405855
chr1 178996264 178996276 TEAD1 JASPAR yes 33461364
chr1 178996264 178996276 TEAD1 JASPAR yes 118405856
chr1 178996266 178996276 TEAD1 JASPAR yes 33461365
chr1 178996266 178996276 TEAD4 JASPAR yes 33461366
chr1 178996266 178996276 TEAD1 JASPAR yes 118405857
chr1 178996266 178996276 TEAD4 JASPAR yes 118405858
chr1 178996267 178996275 TEAD3 JASPAR yes 33461367
chr1 178996267 178996275 TEAD3 JASPAR yes 118405859
chr1 178996276 178996291 MEF2A JASPAR yes 33461368
chr1 178996276 178996291 MEF2A JASPAR yes 118405860
chr1 178996277 178996292 MEF2C JASPAR yes 33461369
chr1 178996277 178996292 MEF2C JASPAR yes 118405861
chr1 178996286 178996300 NR2F1 JASPAR yes 33461370
chr1 178996286 178996300 NR2F1 JASPAR yes 118405862
chr1 178996286 178996301 HNF4G JASPAR yes 33461371
chr1 178996286 178996301 HNF4G JASPAR yes 118405863
SNP sites on vista4046[chr1:178995927-178996290]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 178996005 rs544638630 T C
E2F1 GATA2 MYB POLR2A TGIF1
758047
chr1 178996036 rs75595101 G A
E2F1 GATA2 POLR2A ZNF263
758048
chr1 178996083 rs116514337 T C
GATA2 POLR2A
758049
chr1 178996089 rs116049619 T G
DUX4 GATA2 PHOX2A POLR2A PROP1
758050
chr1 178996161 rs549215103 A T
GATA2 IRF1 IRF2 POLR2A PRDM1 STAT1 STAT2
758051
Genes possibly regulated by vista4046[chr1:178995927-178996290]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 178994939 179045697 + FAM20B ENSG00000116199.7 178994939 0.65 0.99 1604 99012
chr1 179050512 179067158 + TOR3A ENSG00000186283.9 179050512 0.65 0.99 1605 45778
Expression level of Genes
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miRNAs possibly regulated by vista4046[chr1:178995927-178996290]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results