EnhancerDB
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  3. rs549215103[chr1:178996161]
Enhancers that have rs549215103[chr1:178996161]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178994785 179010519 enh771
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Lung Blood (OCI-LY7) Blood (GM12878) Adrenal Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Stomach
chr1 178995927 178996290 vista4046
VISTA
Transcript factors that have rs549215103[chr1:178996161]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178994606 178996177 POLR2A UCSC Txn Factor no Conserved 107847494
chr1 178995685 178996341 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107847516
chr1 178995815 178996393 GATA2 UCSC Txn Factor no Conserved 107847521
chr1 178995836 178996246 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107847522
chr1 178995843 178996393 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353162
chr1 178995843 178996393 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107847523
chr1 178996151 178996172 IRF1 JASPAR yes 33461350
chr1 178996151 178996172 IRF1 JASPAR yes 118405842
chr1 178996155 178996169 STAT1 JASPAR yes 33461351
chr1 178996155 178996169 STAT1 JASPAR yes 118405843
chr1 178996155 178996170 PRDM1 JASPAR yes 33461352
chr1 178996155 178996170 STAT2 JASPAR yes 33461353
chr1 178996155 178996170 PRDM1 JASPAR yes 118405844
chr1 178996155 178996170 STAT2 JASPAR yes 118405845
chr1 178996155 178996173 IRF2 JASPAR yes 33461354
chr1 178996155 178996173 IRF2 JASPAR yes 118405846
Genes associated with rs549215103[chr1:178996161], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More