EnhancerDB
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  3. rs116049619[chr1:178996089]
Enhancers that have rs116049619[chr1:178996089]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178994785 179010519 enh771
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Lung Blood (OCI-LY7) Blood (GM12878) Adrenal Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Stomach
chr1 178995927 178996290 vista4046
VISTA
Transcript factors that have rs116049619[chr1:178996089]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178994606 178996177 POLR2A UCSC Txn Factor no Conserved 107847494
chr1 178995437 178996097 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21353148
chr1 178995437 178996097 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107847504
chr1 178995482 178996132 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21353151
chr1 178995482 178996132 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107847507
chr1 178995623 178996147 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353155
chr1 178995623 178996147 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107847512
chr1 178995685 178996341 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107847516
chr1 178995699 178996155 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21353159
chr1 178995699 178996155 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107847518
chr1 178995815 178996393 GATA2 UCSC Txn Factor no Conserved 107847521
chr1 178995836 178996246 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107847522
chr1 178995843 178996393 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353162
chr1 178995843 178996393 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107847523
chr1 178996089 178996100 DUX4 JASPAR yes 33461343
chr1 178996089 178996100 PHOX2A JASPAR yes 33461344
chr1 178996089 178996100 PROP1 JASPAR yes 33461345
chr1 178996089 178996100 DUX4 JASPAR yes 118405835
chr1 178996089 178996100 PHOX2A JASPAR yes 118405836
chr1 178996089 178996100 PROP1 JASPAR yes 118405837
Genes associated with rs116049619[chr1:178996089], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More