EnhancerDB
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  3. vista42255[chr3:124605050-124605342]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42255[chr3:124605050-124605342]
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Tissue distribution of vista42255
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Transcription factor that possibly regulate vista42255[chr3:124605050-124605342]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 124604852 124606766 POLR2A UCSC Txn Factor no Conserved 108530149
chr3 124605277 124605905 E2F1 UCSC Txn Factor no Conserved 108530150
chr3 124605059 124605073 MTF1 JASPAR yes 5410319
chr3 124605059 124605073 MTF1 JASPAR yes 71043610
chr3 124605060 124605071 NRF1 JASPAR yes 5410320
chr3 124605060 124605071 NRF1 JASPAR yes 71043611
chr3 124605078 124605083 GATA2 JASPAR yes 5410321
chr3 124605078 124605083 GATA2 JASPAR yes 71043612
chr3 124605088 124605092 LFA1 TRANSFAC yes 5410322
chr3 124605088 124605092 LFA1 TRANSFAC yes 71043613
chr3 124605094 124605099 ETS2 TRANSFAC yes 5410323
chr3 124605094 124605099 ETS2 TRANSFAC yes 71043614
chr3 124605094 124605104 TEAD4 JASPAR yes 5410324
chr3 124605094 124605104 TEAD4 JASPAR yes 71043615
chr3 124605101 124605115 SPIC JASPAR yes 5410325
chr3 124605101 124605115 SPIC JASPAR yes 71043616
chr3 124605106 124605117 NFKB1 JASPAR yes 5410326
chr3 124605106 124605117 NFKB1 JASPAR yes 71043617
chr3 124605107 124605112 ETS2 TRANSFAC yes 5410327
chr3 124605107 124605112 ETS2 TRANSFAC yes 71043618
chr3 124605107 124605117 NFKB1 JASPAR yes 5410328
chr3 124605107 124605117 RELA JASPAR yes 5410329
chr3 124605107 124605117 NFKB1 JASPAR yes 71043619
chr3 124605107 124605117 RELA JASPAR yes 71043620
chr3 124605107 124605118 NFKB1 JASPAR yes 5410330
chr3 124605107 124605118 NFKB1 JASPAR yes 71043621
chr3 124605114 124605124 TCF4 JASPAR yes 5410331
chr3 124605114 124605124 TCF4 JASPAR yes 71043622
chr3 124605116 124605125 ZEB1 JASPAR yes 5410332
chr3 124605116 124605125 ZEB1 JASPAR yes 71043623
chr3 124605118 124605123 SP1 TRANSFAC yes 5410333
chr3 124605118 124605123 SP1 TRANSFAC yes 71043624
chr3 124605118 124605138 RREB1 JASPAR yes 5410334
chr3 124605118 124605138 RREB1 JASPAR yes 71043625
chr3 124605120 124605135 RUNX2 JASPAR yes 5410335
chr3 124605120 124605135 RUNX2 JASPAR yes 71043626
chr3 124605124 124605134 RUNX3 JASPAR yes 5410336
chr3 124605124 124605134 RUNX3 JASPAR yes 71043627
chr3 124605125 124605134 RUNX2 JASPAR yes 5410337
chr3 124605125 124605134 RUNX2 JASPAR yes 71043628
chr3 124605141 124605160 CTCF JASPAR yes 5410338
chr3 124605141 124605160 CTCF JASPAR yes 71043629
chr3 124605156 124605166 RUNX3 JASPAR yes 5410339
chr3 124605156 124605166 RUNX3 JASPAR yes 71043630
chr3 124605172 124605185 ELF1 JASPAR yes 5410340
chr3 124605172 124605185 ELF1 JASPAR yes 71043631
chr3 124605175 124605181 PEA3 TRANSFAC yes 5410341
chr3 124605175 124605181 PEA3 TRANSFAC yes 71043632
chr3 124605175 124605186 FLI1 JASPAR yes 5410342
chr3 124605175 124605186 FLI1 JASPAR yes 71043633
chr3 124605175 124605196 ZNF263 JASPAR yes 5410343
chr3 124605175 124605196 ZNF263 JASPAR yes 71043634
chr3 124605184 124605189 SP1 TRANSFAC yes 5410344
chr3 124605184 124605189 SP1 TRANSFAC yes 71043635
chr3 124605185 124605190 SP1 TRANSFAC yes 5410345
chr3 124605185 124605190 SP1 TRANSFAC yes 71043636
chr3 124605185 124605191 SP1 TRANSFAC yes 5410346
chr3 124605185 124605191 SP1 TRANSFAC yes 71043637
chr3 124605188 124605208 RREB1 JASPAR yes 5410347
chr3 124605188 124605208 RREB1 JASPAR yes 71043638
chr3 124605188 124605209 ZNF263 JASPAR yes 5410348
chr3 124605188 124605209 ZNF263 JASPAR yes 71043639
chr3 124605189 124605196 SP1 TRANSFAC yes 5410349
chr3 124605189 124605196 SP1 TRANSFAC yes 71043640
chr3 124605189 124605199 SP1 JASPAR yes 5410350
chr3 124605189 124605199 SP1 JASPAR yes 71043641
chr3 124605189 124605209 RREB1 JASPAR yes 5410351
chr3 124605189 124605209 RREB1 JASPAR yes 71043642
chr3 124605189 124605210 ZNF263 JASPAR yes 5410352
chr3 124605189 124605210 ZNF263 JASPAR yes 71043643
chr3 124605190 124605198 SP1 TRANSFAC yes 5410353
chr3 124605190 124605198 SP1 TRANSFAC yes 71043644
chr3 124605190 124605199 SP1 TRANSFAC yes 5410354
chr3 124605190 124605199 SP1 TRANSFAC yes 71043645
chr3 124605190 124605200 SP1 JASPAR yes 5410355
chr3 124605190 124605200 SP1 JASPAR yes 71043646
chr3 124605191 124605196 SP1 TRANSFAC yes 5410356
chr3 124605191 124605196 SP1 TRANSFAC yes 71043647
chr3 124605191 124605202 E2F4 JASPAR yes 5410357
chr3 124605191 124605202 E2F4 JASPAR yes 71043648
chr3 124605192 124605197 SP1 TRANSFAC yes 5410358
chr3 124605192 124605197 SP1 TRANSFAC yes 71043649
chr3 124605192 124605198 SP1 TRANSFAC yes 5410359
chr3 124605192 124605198 SP1 TRANSFAC yes 71043650
chr3 124605196 124605202 MAZ TRANSFAC yes 5410360
chr3 124605196 124605202 MAZ TRANSFAC yes 71043651
chr3 124605196 124605207 SP1 TRANSFAC yes 5410361
chr3 124605196 124605207 SP1 TRANSFAC yes 71043652
chr3 124605201 124605206 SP1 TRANSFAC yes 5410362
chr3 124605201 124605206 SP1 TRANSFAC yes 71043653
chr3 124605212 124605226 TCF7L2 JASPAR yes 5410363
chr3 124605212 124605226 TCF7L2 JASPAR yes 71043654
chr3 124605216 124605222 TCF1 TRANSFAC yes 71043655
chr3 124605225 124605230 SP1 TRANSFAC yes 71043656
chr3 124605304 124605322 ESR1 JASPAR yes 71043657
chr3 124605315 124605327 TFAP2B JASPAR yes 71043658
chr3 124605315 124605327 TFAP2C JASPAR yes 71043659
chr3 124605315 124605330 TFAP2A JASPAR yes 71043660
chr3 124605317 124605326 TFAP2A JASPAR yes 71043661
chr3 124605328 124605340 INSM1 JASPAR yes 71043662
SNP sites on vista42255[chr3:124605050-124605342]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 124605069 rs184666197 G A
MTF1 NRF1 POLR2A
7000173
chr3 124605070 rs188972865 C A
MTF1 NRF1 POLR2A
7000174
chr3 124605143 rs550006860 G A
CTCF POLR2A
7000175
chr3 124605223 rs577608856 G A
POLR2A TCF7L2
7000176
chr3 124605306 rs181372104 G A
E2F1 ESR1 POLR2A
7000177
Genes possibly regulated by vista42255[chr3:124605050-124605342]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 124480795 124620265 - ITGB5 ENSG00000082781.7 124620265 0.63 1.0 4021 85077
chr3 124624289 124672663 - MUC13 ENSG00000173702.3 124672663 0.99 0.98 4022 32679
Expression level of Genes
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miRNAs possibly regulated by vista42255[chr3:124605050-124605342]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results