EnhancerDB
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  3. vista42329[chr3:127473675-127474224]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42329[chr3:127473675-127474224]
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Tissue distribution of vista42329
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Transcription factor that possibly regulate vista42329[chr3:127473675-127474224]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 127473479 127474190 RUNX3 UCSC Txn Factor no Conserved 108530250
chr3 127473700 127474181 RELA UCSC Txn Factor no Conserved 108530251
chr3 127473701 127474173 NFIC UCSC Txn Factor no Conserved 108530252
chr3 127473733 127474060 EBF1 UCSC Txn Factor no Conserved 108530253
chr3 127474048 127474144 BHLHE40 UCSC Txn Factor no Conserved 108530254
chr3 127473700 127473704 YY1 TRANSFAC yes 5544776
chr3 127473700 127473704 YY1 TRANSFAC yes 71047286
chr3 127473707 127473715 TBX5 JASPAR yes 5544777
chr3 127473707 127473715 TBX5 JASPAR yes 71047287
chr3 127473721 127473730 HIC2 JASPAR yes 5544778
chr3 127473721 127473730 HIC2 JASPAR yes 71047288
chr3 127473724 127473734 CLOCK JASPAR yes 5544779
chr3 127473724 127473734 HEY1 JASPAR yes 5544780
chr3 127473724 127473734 HEY2 JASPAR yes 5544781
chr3 127473724 127473734 MAX JASPAR yes 5544782
chr3 127473724 127473734 MNT JASPAR yes 5544783
chr3 127473724 127473734 CLOCK JASPAR yes 71047289
chr3 127473724 127473734 HEY1 JASPAR yes 71047290
chr3 127473724 127473734 HEY2 JASPAR yes 71047291
chr3 127473724 127473734 MAX JASPAR yes 71047292
chr3 127473724 127473734 MNT JASPAR yes 71047293
chr3 127473724 127473735 USF1 JASPAR yes 5544784
chr3 127473724 127473735 USF1 JASPAR yes 71047294
chr3 127473725 127473732 USF1 JASPAR yes 5544785
chr3 127473725 127473732 USF1 JASPAR yes 71047295
chr3 127473725 127473735 MAX JASPAR yes 5544786
chr3 127473725 127473735 MAX JASPAR yes 71047296
chr3 127473726 127473731 MYC TRANSFAC yes 5544787
chr3 127473726 127473731 USF1 TRANSFAC yes 5544788
chr3 127473726 127473731 USF2 TRANSFAC yes 5544789
chr3 127473726 127473731 MYC TRANSFAC yes 71047297
chr3 127473726 127473731 USF1 TRANSFAC yes 71047298
chr3 127473726 127473731 USF2 TRANSFAC yes 71047299
chr3 127473744 127473755 E2F6 JASPAR yes 5544790
chr3 127473744 127473755 E2F6 JASPAR yes 71047300
chr3 127473744 127473764 PPARG JASPAR yes 5544791
chr3 127473744 127473764 PPARG JASPAR yes 71047301
chr3 127473748 127473753 ETS2 TRANSFAC yes 5544792
chr3 127473748 127473753 ETS2 TRANSFAC yes 71047302
chr3 127473755 127473769 EBF1 JASPAR yes 5544793
chr3 127473755 127473769 EBF1 JASPAR yes 71047303
chr3 127473761 127473775 CREB3L1 JASPAR yes 5544794
chr3 127473761 127473775 CREB3L1 JASPAR yes 71047304
chr3 127473762 127473774 HES7 JASPAR yes 5544795
chr3 127473762 127473774 HES7 JASPAR yes 71047305
chr3 127473767 127473788 IRF1 JASPAR yes 5544796
chr3 127473767 127473788 IRF1 JASPAR yes 71047306
chr3 127473769 127473780 NFKB1 JASPAR yes 5544797
chr3 127473769 127473780 NFKB1 JASPAR yes 71047307
chr3 127473769 127473784 PRDM1 JASPAR yes 5544798
chr3 127473769 127473784 PRDM1 JASPAR yes 71047308
chr3 127473773 127473794 IRF1 JASPAR yes 5544799
chr3 127473773 127473794 IRF1 JASPAR yes 71047309
chr3 127473775 127473789 TCF7L2 JASPAR yes 5544800
chr3 127473775 127473789 TCF7L2 JASPAR yes 71047310
chr3 127473787 127473801 PLAG1 JASPAR yes 5544801
chr3 127473787 127473801 PLAG1 JASPAR yes 71047311
chr3 127473795 127473806 EBF1 JASPAR yes 5544802
chr3 127473795 127473806 EBF1 JASPAR yes 71047312
chr3 127473818 127473824 PEA3 TRANSFAC yes 5544803
chr3 127473818 127473824 PEA3 TRANSFAC yes 71047313
chr3 127473831 127473850 CTCF JASPAR yes 5544804
chr3 127473831 127473850 CTCF JASPAR yes 71047314
chr3 127473841 127473861 RREB1 JASPAR yes 5544805
chr3 127473841 127473861 RREB1 JASPAR yes 71047315
chr3 127473843 127473848 SP1 TRANSFAC yes 5544806
chr3 127473843 127473848 SP1 TRANSFAC yes 71047316
chr3 127473844 127473854 ZNF740 JASPAR yes 5544807
chr3 127473844 127473854 ZNF740 JASPAR yes 71047317
chr3 127473855 127473867 FOXI1 JASPAR yes 5544808
chr3 127473855 127473867 FOXI1 JASPAR yes 71047318
chr3 127473856 127473868 FOXC2 JASPAR yes 5544809
chr3 127473856 127473868 FOXC2 JASPAR yes 71047319
chr3 127473858 127473869 FOXA1 JASPAR yes 5544810
chr3 127473858 127473869 FOXA1 JASPAR yes 71047320
chr3 127473858 127473879 MAFG JASPAR yes 5544811
chr3 127473858 127473879 MAFG JASPAR yes 71047321
chr3 127473859 127473874 FOXP1 JASPAR yes 5544812
chr3 127473859 127473874 FOXP1 JASPAR yes 71047322
chr3 127473860 127473869 SRY JASPAR yes 5544813
chr3 127473860 127473869 SRY JASPAR yes 71047323
chr3 127473860 127473871 FOXP2 JASPAR yes 5544814
chr3 127473860 127473871 FOXP2 JASPAR yes 71047324
chr3 127473873 127473877 YY1 TRANSFAC yes 5544815
chr3 127473873 127473877 YY1 TRANSFAC yes 71047325
chr3 127473886 127473897 NFE2L2 JASPAR yes 5544816
chr3 127473886 127473897 NFE2L2 JASPAR yes 71047326
chr3 127473907 127473921 EBF1 JASPAR yes 5544817
chr3 127473907 127473921 EBF1 JASPAR yes 71047327
chr3 127473907 127473922 TFAP2C JASPAR yes 5544818
chr3 127473907 127473922 TFAP2C JASPAR yes 71047328
chr3 127473912 127473926 RXRB JASPAR yes 5544819
chr3 127473912 127473926 RXRB JASPAR yes 71047329
chr3 127473921 127473925 H4TF2 TRANSFAC yes 5544820
chr3 127473921 127473925 H4TF2 TRANSFAC yes 71047330
chr3 127473929 127473945 GLIS1 JASPAR yes 5544821
chr3 127473929 127473945 GLIS1 JASPAR yes 71047331
chr3 127473930 127473944 GLIS2 JASPAR yes 5544822
chr3 127473930 127473944 GLIS3 JASPAR yes 5544823
chr3 127473930 127473944 GLIS2 JASPAR yes 71047332
chr3 127473930 127473944 GLIS3 JASPAR yes 71047333
chr3 127473950 127473959 THAP1 JASPAR yes 5544824
chr3 127473950 127473959 THAP1 JASPAR yes 71047334
chr3 127473951 127473964 TFAP2A JASPAR yes 5544825
chr3 127473951 127473964 TFAP2A JASPAR yes 71047335
chr3 127473966 127473978 HNF1B JASPAR yes 5544826
chr3 127473966 127473978 HNF1B JASPAR yes 71047336
chr3 127473973 127473986 NFKB1 JASPAR yes 5544827
chr3 127473973 127473986 NFKB2 JASPAR yes 5544828
chr3 127473973 127473986 NFKB1 JASPAR yes 71047337
chr3 127473973 127473986 NFKB2 JASPAR yes 71047338
chr3 127473974 127473984 NFKB1 JASPAR yes 5544829
chr3 127473974 127473984 NFKB1 JASPAR yes 71047339
chr3 127473974 127473985 NFKB1 JASPAR yes 5544830
chr3 127473974 127473985 NFKB1 JASPAR yes 71047340
chr3 127473975 127473985 NFKB1 JASPAR yes 5544831
chr3 127473975 127473985 RELA JASPAR yes 5544832
chr3 127473975 127473985 NFKB1 JASPAR yes 71047341
chr3 127473975 127473985 RELA JASPAR yes 71047342
chr3 127473979 127473993 GLIS2 JASPAR yes 5544833
chr3 127473979 127473993 GLIS2 JASPAR yes 71047343
chr3 127473988 127473999 CEBPB JASPAR yes 5544834
chr3 127473988 127473999 CEBPB JASPAR yes 71047344
chr3 127473989 127473999 CEBPB JASPAR yes 5544835
chr3 127473989 127473999 CEBPE JASPAR yes 5544836
chr3 127473989 127473999 CEBPG JASPAR yes 5544837
chr3 127473989 127473999 CEBPB JASPAR yes 71047345
chr3 127473989 127473999 CEBPE JASPAR yes 71047346
chr3 127473989 127473999 CEBPG JASPAR yes 71047347
chr3 127473989 127474000 CEBPA JASPAR yes 5544838
chr3 127473989 127474000 CEBPA JASPAR yes 71047348
chr3 127474007 127474021 SPI1 JASPAR yes 5544839
chr3 127474007 127474021 SPI1 JASPAR yes 71047349
chr3 127474017 127474025 GATA3 JASPAR yes 5544840
chr3 127474017 127474025 GATA3 JASPAR yes 71047350
chr3 127474034 127474055 IRF1 JASPAR yes 5544841
chr3 127474034 127474055 IRF1 JASPAR yes 71047351
chr3 127474038 127474043 H4TF1 TRANSFAC yes 5544842
chr3 127474038 127474043 H4TF1 TRANSFAC yes 71047352
chr3 127474047 127474057 HOXA2 JASPAR yes 5544843
chr3 127474047 127474057 NOTO JASPAR yes 5544844
chr3 127474047 127474057 HOXA2 JASPAR yes 71047353
chr3 127474047 127474057 NOTO JASPAR yes 71047354
chr3 127474050 127474054 YY1 TRANSFAC yes 5544845
chr3 127474050 127474054 YY1 TRANSFAC yes 71047355
chr3 127474052 127474070 ESR1 JASPAR yes 5544846
chr3 127474052 127474070 ESR1 JASPAR yes 71047356
chr3 127474053 127474068 ESR2 JASPAR yes 5544847
chr3 127474053 127474068 ESR2 JASPAR yes 71047357
chr3 127474053 127474073 ESR1 JASPAR yes 5544848
chr3 127474053 127474073 ESR1 JASPAR yes 71047358
chr3 127474060 127474071 ESRRA JASPAR yes 5544849
chr3 127474060 127474071 ESRRA JASPAR yes 71047359
chr3 127474076 127474087 NFKB1 JASPAR yes 5544850
chr3 127474076 127474087 NFKB1 JASPAR yes 71047360
chr3 127474079 127474091 IRF1 JASPAR yes 5544851
chr3 127474079 127474091 IRF1 JASPAR yes 71047361
chr3 127474085 127474099 STAT1 JASPAR yes 5544852
chr3 127474085 127474099 STAT1 JASPAR yes 71047362
chr3 127474085 127474100 STAT2 JASPAR yes 5544853
chr3 127474085 127474100 STAT2 JASPAR yes 71047363
chr3 127474085 127474103 IRF2 JASPAR yes 5544854
chr3 127474085 127474103 IRF2 JASPAR yes 71047364
chr3 127474086 127474101 LEF1 JASPAR yes 5544855
chr3 127474086 127474101 LEF1 JASPAR yes 71047365
chr3 127474086 127474102 SOX4 JASPAR yes 5544856
chr3 127474086 127474102 SOX4 JASPAR yes 71047366
chr3 127474099 127474109 BHLHE40 JASPAR yes 5544857
chr3 127474099 127474109 BHLHE41 JASPAR yes 5544858
chr3 127474099 127474109 MLXIPL JASPAR yes 5544859
chr3 127474099 127474109 MLX JASPAR yes 5544860
chr3 127474099 127474109 TFE3 JASPAR yes 5544861
chr3 127474099 127474109 BHLHE40 JASPAR yes 71047367
chr3 127474099 127474109 BHLHE41 JASPAR yes 71047368
chr3 127474099 127474109 MLXIPL JASPAR yes 71047369
chr3 127474099 127474109 MLX JASPAR yes 71047370
chr3 127474099 127474109 TFE3 JASPAR yes 71047371
chr3 127474101 127474106 MYC TRANSFAC yes 5544862
chr3 127474101 127474106 USF1 TRANSFAC yes 5544863
chr3 127474101 127474106 USF2 TRANSFAC yes 5544864
chr3 127474101 127474106 MYC TRANSFAC yes 71047372
chr3 127474101 127474106 USF1 TRANSFAC yes 71047373
chr3 127474101 127474106 USF2 TRANSFAC yes 71047374
chr3 127474122 127474133 HOXC13 JASPAR yes 5544865
chr3 127474122 127474133 HOXC13 JASPAR yes 71047375
chr3 127474128 127474142 SPI1 JASPAR yes 5544866
chr3 127474128 127474142 SPI1 JASPAR yes 71047376
chr3 127474129 127474142 ELF1 JASPAR yes 5544867
chr3 127474129 127474142 ELF1 JASPAR yes 71047377
chr3 127474129 127474150 ZNF263 JASPAR yes 5544868
chr3 127474129 127474150 ZNF263 JASPAR yes 71047378
chr3 127474132 127474138 PEA3 TRANSFAC yes 5544869
chr3 127474132 127474138 PEA3 TRANSFAC yes 71047379
chr3 127474132 127474153 ZNF263 JASPAR yes 5544870
chr3 127474132 127474153 ZNF263 JASPAR yes 71047380
chr3 127474151 127474157 HiNF-A TRANSFAC yes 5544871
chr3 127474151 127474157 HiNF-A TRANSFAC yes 71047381
chr3 127474151 127474166 SOX21 JASPAR yes 5544872
chr3 127474151 127474166 SOX21 JASPAR yes 71047382
chr3 127474166 127474178 TAL1 JASPAR yes 5544873
chr3 127474166 127474178 TAL1 JASPAR yes 71047383
chr3 127474167 127474179 NHLH1 JASPAR yes 5544874
chr3 127474167 127474179 NHLH1 JASPAR yes 71047384
chr3 127474168 127474178 MSC JASPAR yes 5544875
chr3 127474168 127474178 MYF6 JASPAR yes 5544876
chr3 127474168 127474178 NHLH1 JASPAR yes 5544877
chr3 127474168 127474178 TFAP4 JASPAR yes 5544878
chr3 127474168 127474178 MSC JASPAR yes 71047385
chr3 127474168 127474178 MYF6 JASPAR yes 71047386
chr3 127474168 127474178 NHLH1 JASPAR yes 71047387
chr3 127474168 127474178 TFAP4 JASPAR yes 71047388
chr3 127474186 127474190 TEAD2 TRANSFAC yes 5544879
chr3 127474186 127474190 TEAD2 TRANSFAC yes 71047389
chr3 127474186 127474191 TBP TRANSFAC yes 5544880
chr3 127474186 127474191 TBP TRANSFAC yes 71047390
chr3 127474192 127474197 GATA2 JASPAR yes 5544881
chr3 127474192 127474197 GATA2 JASPAR yes 71047391
chr3 127474203 127474214 E2F6 JASPAR yes 5544882
chr3 127474203 127474214 E2F6 JASPAR yes 71047392
chr3 127474204 127474225 ZNF263 JASPAR yes 5544883
chr3 127474204 127474225 ZNF263 JASPAR yes 71047393
chr3 127474218 127474231 TFAP2B JASPAR yes 5544884
chr3 127474218 127474231 TFAP2B JASPAR yes 71047394
SNP sites on vista42329[chr3:127473675-127474224]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 127473730 rs73861709 G A
CLOCK HEY1 HEY2 HIC2 MAX MNT MYC NFIC RELA RUNX3 USF1 USF2
7014984
chr3 127473827 rs11915484 G A
EBF1 NFIC RELA RUNX3
7014985
chr3 127473874 rs188522158 C G,T
EBF1 FOXP1 MAFG NFIC RELA RUNX3 YY1
7014986
chr3 127473891 rs148721207 C T
EBF1 NFE2L2 NFIC RELA RUNX3
7014987
chr3 127473897 rs114494057 C T
EBF1 NFE2L2 NFIC RELA RUNX3
7014988
chr3 127473908 rs111328282 A G
EBF1 NFIC RELA RUNX3 TFAP2C
7014989
chr3 127473916 rs114531308 G A
EBF1 NFIC RELA RUNX3 RXRB TFAP2C
7014990
chr3 127473961 rs16830397 G A
EBF1 NFIC RELA RUNX3 TFAP2A
7014991
chr3 127473986 rs559796322 A G
EBF1 GLIS2 NFIC NFKB1 NFKB2 RELA RUNX3
7014992
chr3 127474030 rs664910 G A
EBF1 NFIC RELA RUNX3
7014993
chr3 127474081 rs193234990 A G
BHLHE40 IRF1 NFIC NFKB1 RELA RUNX3
7014994
Genes possibly regulated by vista42329[chr3:127473675-127474224]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 127391778 127399768 + ABTB1 ENSG00000114626.13 127391778 0.82 1.0 4046 18103
chr3 127407909 127542051 - MGLL ENSG00000074416.9 127542051 0.85 0.99 4047 32173
Expression level of Genes
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miRNAs possibly regulated by vista42329[chr3:127473675-127474224]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results