EnhancerDB
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  3. rs559796322[chr3:127473986]
Enhancers that have rs559796322[chr3:127473986]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 127460425 127476155 enh7513
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
chr3 127473675 127474224 vista42329
VISTA
Transcript factors that have rs559796322[chr3:127473986]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 127473479 127474190 RUNX3 UCSC Txn Factor no Conserved 108530250
chr3 127473700 127474181 RELA UCSC Txn Factor no Conserved 108530251
chr3 127473701 127474173 NFIC UCSC Txn Factor no Conserved 108530252
chr3 127473733 127474060 EBF1 UCSC Txn Factor no Conserved 108530253
chr3 127473973 127473986 NFKB1 JASPAR yes 5544827
chr3 127473973 127473986 NFKB2 JASPAR yes 5544828
chr3 127473973 127473986 NFKB1 JASPAR yes 71047337
chr3 127473973 127473986 NFKB2 JASPAR yes 71047338
chr3 127473979 127473993 GLIS2 JASPAR yes 5544833
chr3 127473979 127473993 GLIS2 JASPAR yes 71047343
Genes associated with rs559796322[chr3:127473986], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More