EnhancerDB
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  3. vista43360[chr3:181440813-181441146]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43360[chr3:181440813-181441146]
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Tissue distribution of vista43360
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Transcription factor that possibly regulate vista43360[chr3:181440813-181441146]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 181440817 181440838 REST JASPAR yes 8059395
chr3 181440817 181440838 REST JASPAR yes 71095248
chr3 181440844 181440855 PHOX2A JASPAR yes 8059396
chr3 181440844 181440855 PROP1 JASPAR yes 8059397
chr3 181440844 181440855 PHOX2A JASPAR yes 71095249
chr3 181440844 181440855 PROP1 JASPAR yes 71095250
chr3 181440863 181440867 LFA1 TRANSFAC yes 8059398
chr3 181440863 181440867 LFA1 TRANSFAC yes 71095251
chr3 181440884 181440899 HSF1 JASPAR yes 8059399
chr3 181440884 181440899 HSF1 JASPAR yes 71095252
chr3 181440891 181440895 H1TF2 TRANSFAC yes 8059400
chr3 181440891 181440895 NFE TRANSFAC yes 8059401
chr3 181440891 181440895 SRF TRANSFAC yes 8059402
chr3 181440891 181440895 H1TF2 TRANSFAC yes 71095253
chr3 181440891 181440895 NFE TRANSFAC yes 71095254
chr3 181440891 181440895 SRF TRANSFAC yes 71095255
chr3 181440895 181440900 ETS2 TRANSFAC yes 8059403
chr3 181440895 181440900 ETS2 TRANSFAC yes 71095256
chr3 181440914 181440935 ZNF263 JASPAR yes 8059404
chr3 181440914 181440935 ZNF263 JASPAR yes 71095257
chr3 181440915 181440936 ZNF263 JASPAR yes 8059405
chr3 181440915 181440936 ZNF263 JASPAR yes 71095258
chr3 181440922 181440937 NR2C2 JASPAR yes 8059406
chr3 181440922 181440937 NR2C2 JASPAR yes 71095259
chr3 181440928 181440934 NFE2 TRANSFAC yes 8059407
chr3 181440928 181440934 NFE2 TRANSFAC yes 71095260
chr3 181440932 181440938 SP1 TRANSFAC yes 8059408
chr3 181440932 181440938 SP1 TRANSFAC yes 71095261
chr3 181440932 181440942 SP1 JASPAR yes 8059409
chr3 181440932 181440942 SP1 JASPAR yes 71095262
chr3 181440934 181440939 SP1 TRANSFAC yes 8059410
chr3 181440934 181440939 SP1 TRANSFAC yes 71095263
chr3 181440957 181440968 SPDEF JASPAR yes 8059411
chr3 181440957 181440968 SPDEF JASPAR yes 71095264
chr3 181440970 181440974 YY1 TRANSFAC yes 8059412
chr3 181440970 181440974 YY1 TRANSFAC yes 71095265
chr3 181440980 181441001 ZNF263 JASPAR yes 8059413
chr3 181440980 181441001 ZNF263 JASPAR yes 71095266
chr3 181440982 181440993 E2F6 JASPAR yes 8059414
chr3 181440982 181440993 E2F6 JASPAR yes 71095267
chr3 181440984 181440992 SP1 TRANSFAC yes 8059415
chr3 181440984 181440992 SP1 TRANSFAC yes 71095268
chr3 181440984 181440994 SP1 JASPAR yes 8059416
chr3 181440984 181440994 SP1 JASPAR yes 71095269
chr3 181440984 181441005 ZNF263 JASPAR yes 8059417
chr3 181440984 181441005 ZNF263 JASPAR yes 71095270
chr3 181440986 181440992 MAZ TRANSFAC yes 8059418
chr3 181440986 181440992 MAZ TRANSFAC yes 71095271
chr3 181440987 181440997 MZF1 JASPAR yes 8059419
chr3 181440987 181440997 MZF1 JASPAR yes 71095272
chr3 181440991 181441008 RARA JASPAR yes 8059420
chr3 181440991 181441008 RXRA JASPAR yes 8059421
chr3 181440991 181441008 RARA JASPAR yes 71095273
chr3 181440991 181441008 RXRA JASPAR yes 71095274
chr3 181441014 181441030 ZNF143 JASPAR yes 8059422
chr3 181441014 181441030 ZNF143 JASPAR yes 71095275
chr3 181441032 181441041 THAP1 JASPAR yes 8059423
chr3 181441032 181441041 THAP1 JASPAR yes 71095276
chr3 181441035 181441039 LFA1 TRANSFAC yes 8059424
chr3 181441035 181441039 LFA1 TRANSFAC yes 71095277
chr3 181441047 181441063 ZNF143 JASPAR yes 8059425
chr3 181441047 181441063 ZNF143 JASPAR yes 71095278
chr3 181441080 181441089 TFAP2A JASPAR yes 8059426
chr3 181441080 181441089 TFAP2A JASPAR yes 71095279
chr3 181441120 181441138 TP53 JASPAR yes 8059427
chr3 181441120 181441138 TP53 JASPAR yes 71095280
chr3 181441134 181441148 EBF1 JASPAR yes 8059428
chr3 181441134 181441148 EBF1 JASPAR yes 71095281
chr3 181441136 181441147 EBF1 JASPAR yes 8059429
chr3 181441136 181441147 EBF1 JASPAR yes 71095282
chr3 181441140 181441145 TFAP2A TRANSFAC yes 8059430
chr3 181441140 181441145 TFAP2A TRANSFAC yes 71095283
chr3 181441140 181441146 MZF1 JASPAR yes 8059431
chr3 181441140 181441146 MZF1 JASPAR yes 71095284
SNP sites on vista43360[chr3:181440813-181441146]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 181440927 rs530851368 C G
NR2C2 ZNF263
7235287
chr3 181441007 rs370080271 CAGGACAGTTCCCTCAGTGCCACCACTGCGGGCA C
RARA RXRA
7235288
chr3 181441007 rs558825243 CAGGACAGTTCCCTCAGTGCCACCACTGCGGGCA C
RARA RXRA
7235289
chr3 181441040 rs568674071 A C
THAP1
7235290
chr3 181441084 rs13090842 C T
TFAP2A
7235291
Genes possibly regulated by vista43360[chr3:181440813-181441146]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 181429714 181432221 + SOX2 ENSG00000181449.2 181429714 0.93 0.94 4305 88901
Expression level of Genes
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miRNAs possibly regulated by vista43360[chr3:181440813-181441146]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results