EnhancerDB
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  3. vista4553[chr1:201463619-201463933]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4553[chr1:201463619-201463933]
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Tissue distribution of vista4553
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Transcription factor that possibly regulate vista4553[chr1:201463619-201463933]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 201463614 201463620 SOX10 JASPAR yes 34498040
chr1 201463614 201463620 SOX10 JASPAR yes 118431737
chr1 201463630 201463645 FOXP1 JASPAR yes 34498041
chr1 201463630 201463645 FOXP1 JASPAR yes 118431738
chr1 201463631 201463642 FOXP2 JASPAR yes 34498042
chr1 201463631 201463642 FOXP2 JASPAR yes 118431739
chr1 201463631 201463645 FOXF2 JASPAR yes 34498043
chr1 201463631 201463645 FOXF2 JASPAR yes 118431740
chr1 201463632 201463640 FOXD1 JASPAR yes 34498044
chr1 201463632 201463640 FOXG1 JASPAR yes 34498045
chr1 201463632 201463640 FOXO3 JASPAR yes 34498046
chr1 201463632 201463640 FOXD1 JASPAR yes 118431741
chr1 201463632 201463640 FOXG1 JASPAR yes 118431742
chr1 201463632 201463640 FOXO3 JASPAR yes 118431743
chr1 201463633 201463640 FOXD2 JASPAR yes 34498047
chr1 201463633 201463640 FOXI1 JASPAR yes 34498048
chr1 201463633 201463640 FOXL1 JASPAR yes 34498049
chr1 201463633 201463640 FOXO4 JASPAR yes 34498050
chr1 201463633 201463640 FOXO6 JASPAR yes 34498051
chr1 201463633 201463640 FOXP3 JASPAR yes 34498052
chr1 201463633 201463640 FOXD2 JASPAR yes 118431744
chr1 201463633 201463640 FOXI1 JASPAR yes 118431745
chr1 201463633 201463640 FOXL1 JASPAR yes 118431746
chr1 201463633 201463640 FOXO4 JASPAR yes 118431747
chr1 201463633 201463640 FOXO6 JASPAR yes 118431748
chr1 201463633 201463640 FOXP3 JASPAR yes 118431749
chr1 201463640 201463646 MZF1 JASPAR yes 34498053
chr1 201463640 201463646 MZF1 JASPAR yes 118431750
chr1 201463658 201463673 TFAP2A JASPAR yes 34498054
chr1 201463658 201463673 TFAP2C JASPAR yes 34498055
chr1 201463658 201463673 TFAP2A JASPAR yes 118431751
chr1 201463658 201463673 TFAP2C JASPAR yes 118431752
chr1 201463667 201463675 MEIS2 JASPAR yes 34498056
chr1 201463667 201463675 MEIS3 JASPAR yes 34498057
chr1 201463667 201463675 MEIS2 JASPAR yes 118431753
chr1 201463667 201463675 MEIS3 JASPAR yes 118431754
chr1 201463668 201463672 NFE TRANSFAC yes 34498058
chr1 201463668 201463672 NFE TRANSFAC yes 118431755
chr1 201463670 201463680 SREBF2 JASPAR yes 34498059
chr1 201463670 201463680 SREBF2 JASPAR yes 118431756
chr1 201463675 201463694 PAX5 JASPAR yes 34498060
chr1 201463675 201463694 PAX5 JASPAR yes 118431757
chr1 201463689 201463700 SPDEF JASPAR yes 34498061
chr1 201463689 201463700 SPDEF JASPAR yes 118431758
chr1 201463690 201463701 FLI1 JASPAR yes 34498062
chr1 201463690 201463701 FLI1 JASPAR yes 118431759
chr1 201463691 201463698 PEA3 TRANSFAC yes 34498063
chr1 201463691 201463698 PEA3 TRANSFAC yes 118431760
chr1 201463699 201463704 SP1 TRANSFAC yes 34498064
chr1 201463699 201463704 SP1 TRANSFAC yes 118431761
chr1 201463727 201463739 NHLH1 JASPAR yes 34498065
chr1 201463727 201463739 NHLH1 JASPAR yes 118431762
chr1 201463730 201463739 ZEB1 JASPAR yes 34498066
chr1 201463730 201463739 ZEB1 JASPAR yes 118431763
chr1 201463732 201463737 SP1 TRANSFAC yes 34498067
chr1 201463732 201463737 SP1 TRANSFAC yes 118431764
chr1 201463737 201463756 RFX2 JASPAR yes 34498068
chr1 201463737 201463756 RFX2 JASPAR yes 118431765
chr1 201463771 201463776 MYB TRANSFAC yes 34498069
chr1 201463771 201463776 MYB TRANSFAC yes 118431766
chr1 201463771 201463786 SCRT1 JASPAR yes 34498070
chr1 201463771 201463786 SCRT1 JASPAR yes 118431767
chr1 201463775 201463784 SNAI2 JASPAR yes 34498071
chr1 201463775 201463784 SNAI2 JASPAR yes 118431768
chr1 201463775 201463785 FIGLA JASPAR yes 34498072
chr1 201463775 201463785 MSC JASPAR yes 34498073
chr1 201463775 201463785 FIGLA JASPAR yes 118431769
chr1 201463775 201463785 MSC JASPAR yes 118431770
chr1 201463781 201463795 TLX1 JASPAR yes 34498074
chr1 201463781 201463795 TLX1 JASPAR yes 118431771
chr1 201463799 201463804 GATA2 JASPAR yes 34498075
chr1 201463799 201463804 GATA2 JASPAR yes 118431772
chr1 201463828 201463834 TCF4 TRANSFAC yes 34498076
chr1 201463828 201463834 TCF4 TRANSFAC yes 118431773
chr1 201463845 201463860 AR JASPAR yes 34498077
chr1 201463845 201463860 AR JASPAR yes 118431774
chr1 201463874 201463880 MZF1 JASPAR yes 34498078
chr1 201463874 201463880 MZF1 JASPAR yes 118431775
chr1 201463886 201463891 SP1 TRANSFAC yes 34498079
chr1 201463886 201463891 SP1 TRANSFAC yes 118431776
chr1 201463887 201463901 NR2F1 JASPAR yes 34498080
chr1 201463887 201463901 NR2F1 JASPAR yes 118431777
chr1 201463912 201463918 LEF1 TRANSFAC yes 34498081
chr1 201463912 201463918 SOX10 JASPAR yes 34498082
chr1 201463912 201463918 LEF1 TRANSFAC yes 118431778
chr1 201463912 201463918 SOX10 JASPAR yes 118431779
chr1 201463915 201463928 EOMES JASPAR yes 34498083
chr1 201463915 201463928 EOMES JASPAR yes 118431780
chr1 201463917 201463928 TBX20 JASPAR yes 34498084
chr1 201463917 201463928 TBX2 JASPAR yes 34498085
chr1 201463917 201463928 TBX20 JASPAR yes 118431781
chr1 201463917 201463928 TBX2 JASPAR yes 118431782
chr1 201463917 201463937 TBX19 JASPAR yes 34498086
chr1 201463917 201463937 TBX19 JASPAR yes 118431783
chr1 201463918 201463928 SREBF1 JASPAR yes 34498087
chr1 201463918 201463928 SREBF2 JASPAR yes 34498088
chr1 201463918 201463928 TBX21 JASPAR yes 34498089
chr1 201463918 201463928 SREBF1 JASPAR yes 118431784
chr1 201463918 201463928 SREBF2 JASPAR yes 118431785
chr1 201463918 201463928 TBX21 JASPAR yes 118431786
chr1 201463919 201463927 MGA JASPAR yes 34498090
chr1 201463919 201463927 MGA JASPAR yes 118431787
chr1 201463919 201463935 T JASPAR yes 34498091
chr1 201463919 201463935 T JASPAR yes 118431788
chr1 201463920 201463932 YY1 JASPAR yes 34498092
chr1 201463920 201463932 YY1 JASPAR yes 118431789
SNP sites on vista4553[chr1:201463619-201463933]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 201463720 rs113562991 C T no 854192
chr1 201463740 rs552748736 C T
RFX2
854193
chr1 201463821 rs76328368 T G no 854194
chr1 201463838 rs7538112 G A no 854195
chr1 201463840 rs527933732 G GT no 854196
chr1 201463881 rs61376648 T A no 854197
chr1 201463918 rs544677 T C
EOMES LEF1 SOX10 SREBF1 SREBF2 TBX19 TBX2 TBX20 TBX21
854198
chr1 201463925 rs682137 C T
EOMES MGA SREBF1 SREBF2 T TBX19 TBX2 TBX20 TBX21 YY1
854199
Genes possibly regulated by vista4553[chr1:201463619-201463933]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 201342372 201368736 - LAD1 ENSG00000159166.9 201368736 0.9 1.0 1705 5117
chr1 201373625 201398994 - TNNI1 ENSG00000159173.14 201398994 0.98 0.97 1706 35375
chr1 201434620 201438365 - PHLDA3 ENSG00000174307.5 201438365 0.73 1.0 1707 74746
chr1 201452658 201478584 - CSRP1 ENSG00000159176.9 201478584 0.86 0.99 1708 85349
Expression level of Genes
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miRNAs possibly regulated by vista4553[chr1:201463619-201463933]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results