EnhancerDB
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Enhancers that have rs552748736[chr1:201463740]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201463125 201475335 enh12520
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr1 201463619 201463933 vista4553
VISTA
Transcript factors that have rs552748736[chr1:201463740]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201459381 201463819 ZNF143 GTRD no Epithelial (MCF-7) 21364345
chr1 201459381 201463819 ZNF143 GTRD no Epithelial (MCF-7) 107856345
chr1 201459743 201463786 ZNF274 GTRD no Cervix (HeLa-S3) 107856347
chr1 201460422 201464497 ZNF143 GTRD no Epithelial (MCF-7) 21364347
chr1 201460422 201464497 ZNF143 GTRD no Epithelial (MCF-7) 107856348
chr1 201460556 201463882 ZBTB33 GTRD no Lung (A549) 107856349
chr1 201460594 201463747 TCF7L2 GTRD no Colon (HCT116) 107856350
chr1 201462585 201464790 ZBTB33 GTRD no Lung (A549) 107856352
chr1 201462603 201463848 ZBTB33 GTRD no Lung (A549) 107856353
chr1 201462621 201463744 ZNF274 GTRD no Blood (GM12878) 107856354
chr1 201462641 201464129 ZBTB33 GTRD no Brain (SK-N-SH) 107856356
chr1 201462711 201463816 ZBTB33 GTRD no Brain (SK-N-SH) 107856361
chr1 201462724 201463779 ZNF274 GTRD no Blood (GM12878) 107856362
chr1 201462724 201463789 ZBTB33 GTRD no Lung (A549) 107856363
chr1 201462797 201463745 ZNF143 GTRD no Epithelial (MCF-7) 21364351
chr1 201462797 201463745 ZNF143 GTRD no Epithelial (MCF-7) 107856367
chr1 201462808 201463744 ZBTB33 GTRD no Lung (A549) 107856368
chr1 201462835 201463868 ZNF143 GTRD no Epithelial (MCF-7) 21364352
chr1 201462835 201463868 ZNF143 GTRD no Epithelial (MCF-7) 107856369
chr1 201462874 201463754 ZNF143 GTRD no Epithelial (MCF-7) 21364354
chr1 201462874 201463754 ZNF143 GTRD no Epithelial (MCF-7) 107856372
chr1 201462906 201464337 ZNF143 GTRD no Epithelial (MCF-7) 21364356
chr1 201462906 201464337 ZNF143 GTRD no Epithelial (MCF-7) 107856374
chr1 201462949 201463744 ZNF143 GTRD no Epithelial (MCF-7) 21364358
chr1 201462949 201463744 ZNF143 GTRD no Epithelial (MCF-7) 107856376
chr1 201463370 201463795 ZNF143 GTRD no Epithelial (MCF-7) 21364360
chr1 201463370 201463795 ZNF143 GTRD no Epithelial (MCF-7) 107856378
chr1 201463402 201464184 TCF7L2 GTRD no Colon (HCT116) 107856379
chr1 201463501 201463901 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21364361
chr1 201463501 201463901 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107856380
chr1 201463737 201463756 RFX2 JASPAR yes 34498068
chr1 201463737 201463756 RFX2 JASPAR yes 118431765
Genes associated with rs552748736[chr1:201463740], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More