EnhancerDB
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Enhancers that have rs544677[chr1:201463918]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201463125 201475335 enh12520
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr1 201463619 201463933 vista4553
VISTA
Transcript factors that have rs544677[chr1:201463918]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201460422 201464497 ZNF143 GTRD no Epithelial (MCF-7) 21364347
chr1 201460422 201464497 ZNF143 GTRD no Epithelial (MCF-7) 107856348
chr1 201462585 201464790 ZBTB33 GTRD no Lung (A549) 107856352
chr1 201462641 201464129 ZBTB33 GTRD no Brain (SK-N-SH) 107856356
chr1 201462906 201464337 ZNF143 GTRD no Epithelial (MCF-7) 21364356
chr1 201462906 201464337 ZNF143 GTRD no Epithelial (MCF-7) 107856374
chr1 201463402 201464184 TCF7L2 GTRD no Colon (HCT116) 107856379
chr1 201463912 201463918 LEF1 TRANSFAC yes 34498081
chr1 201463912 201463918 SOX10 JASPAR yes 34498082
chr1 201463912 201463918 LEF1 TRANSFAC yes 118431778
chr1 201463912 201463918 SOX10 JASPAR yes 118431779
chr1 201463915 201463928 EOMES JASPAR yes 34498083
chr1 201463915 201463928 EOMES JASPAR yes 118431780
chr1 201463917 201463928 TBX20 JASPAR yes 34498084
chr1 201463917 201463928 TBX2 JASPAR yes 34498085
chr1 201463917 201463928 TBX20 JASPAR yes 118431781
chr1 201463917 201463928 TBX2 JASPAR yes 118431782
chr1 201463917 201463937 TBX19 JASPAR yes 34498086
chr1 201463917 201463937 TBX19 JASPAR yes 118431783
chr1 201463918 201463928 SREBF1 JASPAR yes 34498087
chr1 201463918 201463928 SREBF2 JASPAR yes 34498088
chr1 201463918 201463928 TBX21 JASPAR yes 34498089
chr1 201463918 201463928 SREBF1 JASPAR yes 118431784
chr1 201463918 201463928 SREBF2 JASPAR yes 118431785
chr1 201463918 201463928 TBX21 JASPAR yes 118431786
Genes associated with rs544677[chr1:201463918], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More