EnhancerDB
  1. Home
  2. Enhancers
  3. vista4627[chr1:203259429-203259985]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4627[chr1:203259429-203259985]
Back to top
Tissue distribution of vista4627
Back to top
Transcription factor that possibly regulate vista4627[chr1:203259429-203259985]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 203258229 203260240 POLR2A UCSC Txn Factor no Conserved 107858338
chr1 203258229 203260240 POLR2A UCSC Txn Factor no Conserved 107858339
chr1 203259579 203259871 E2F6 UCSC Txn Factor no Conserved 107858457
chr1 203259606 203259986 ELK1 UCSC Txn Factor no Conserved 107858460
chr1 203259607 203259856 EGR1 UCSC Txn Factor no Conserved 107858463
chr1 203259651 203259991 SRF UCSC Txn Factor no Conserved 107858468
chr1 203259692 203260272 ELK4 UCSC Txn Factor no Conserved 107858475
chr1 203259436 203259442 HiNF-A TRANSFAC yes 34614327
chr1 203259436 203259442 HiNF-A TRANSFAC yes 118435233
chr1 203259441 203259445 YY1 TRANSFAC yes 34614328
chr1 203259441 203259445 YY1 TRANSFAC yes 118435234
chr1 203259448 203259453 SP1 TRANSFAC yes 34614329
chr1 203259448 203259453 SP1 TRANSFAC yes 118435235
chr1 203259461 203259478 RARA JASPAR yes 34614330
chr1 203259461 203259478 RARA JASPAR yes 118435236
chr1 203259462 203259466 H4TF2 TRANSFAC yes 34614331
chr1 203259462 203259466 H4TF2 TRANSFAC yes 118435237
chr1 203259478 203259488 FIGLA JASPAR yes 34614332
chr1 203259478 203259488 ID4 JASPAR yes 34614333
chr1 203259478 203259488 TCF3 JASPAR yes 34614334
chr1 203259478 203259488 TCF4 JASPAR yes 34614335
chr1 203259478 203259488 FIGLA JASPAR yes 118435238
chr1 203259478 203259488 ID4 JASPAR yes 118435239
chr1 203259478 203259488 TCF3 JASPAR yes 118435240
chr1 203259478 203259488 TCF4 JASPAR yes 118435241
chr1 203259479 203259488 SNAI2 JASPAR yes 34614336
chr1 203259479 203259488 SNAI2 JASPAR yes 118435242
chr1 203259480 203259485 USF2 TRANSFAC yes 34614337
chr1 203259480 203259485 USF2 TRANSFAC yes 118435243
chr1 203259487 203259497 SP1 JASPAR yes 34614338
chr1 203259487 203259497 SP1 JASPAR yes 118435244
chr1 203259511 203259523 HES7 JASPAR yes 34614339
chr1 203259511 203259523 PKNOX1 JASPAR yes 34614340
chr1 203259511 203259523 PKNOX2 JASPAR yes 34614341
chr1 203259511 203259523 TGIF1 JASPAR yes 34614342
chr1 203259511 203259523 TGIF2 JASPAR yes 34614343
chr1 203259511 203259523 HES7 JASPAR yes 118435245
chr1 203259511 203259523 PKNOX1 JASPAR yes 118435246
chr1 203259511 203259523 PKNOX2 JASPAR yes 118435247
chr1 203259511 203259523 TGIF1 JASPAR yes 118435248
chr1 203259511 203259523 TGIF2 JASPAR yes 118435249
chr1 203259512 203259521 SNAI2 JASPAR yes 34614344
chr1 203259512 203259521 SNAI2 JASPAR yes 118435250
chr1 203259512 203259522 HEY2 JASPAR yes 34614345
chr1 203259512 203259522 ID4 JASPAR yes 34614346
chr1 203259512 203259522 TCF3 JASPAR yes 34614347
chr1 203259512 203259522 TCF4 JASPAR yes 34614348
chr1 203259512 203259522 HEY2 JASPAR yes 118435251
chr1 203259512 203259522 ID4 JASPAR yes 118435252
chr1 203259512 203259522 TCF3 JASPAR yes 118435253
chr1 203259512 203259522 TCF4 JASPAR yes 118435254
chr1 203259515 203259523 TBX15 JASPAR yes 34614349
chr1 203259515 203259523 TBX1 JASPAR yes 34614350
chr1 203259515 203259523 TBX4 JASPAR yes 34614351
chr1 203259515 203259523 TBX5 JASPAR yes 34614352
chr1 203259515 203259523 TBX15 JASPAR yes 118435255
chr1 203259515 203259523 TBX1 JASPAR yes 118435256
chr1 203259515 203259523 TBX4 JASPAR yes 118435257
chr1 203259515 203259523 TBX5 JASPAR yes 118435258
chr1 203259527 203259542 TFAP2C JASPAR yes 34614353
chr1 203259527 203259542 TFAP2C JASPAR yes 118435259
chr1 203259529 203259541 INSM1 JASPAR yes 34614354
chr1 203259529 203259541 INSM1 JASPAR yes 118435260
chr1 203259546 203259567 ZNF263 JASPAR yes 34614355
chr1 203259546 203259567 ZNF263 JASPAR yes 118435261
chr1 203259549 203259555 MZF1 JASPAR yes 34614356
chr1 203259549 203259555 MZF1 JASPAR yes 118435262
chr1 203259550 203259570 RREB1 JASPAR yes 34614357
chr1 203259550 203259570 RREB1 JASPAR yes 118435263
chr1 203259552 203259572 RREB1 JASPAR yes 34614358
chr1 203259552 203259572 RREB1 JASPAR yes 118435264
chr1 203259559 203259569 ZNF740 JASPAR yes 34614359
chr1 203259559 203259569 ZNF740 JASPAR yes 118435265
chr1 203259579 203259583 LFA1 TRANSFAC yes 34614360
chr1 203259579 203259583 LFA1 TRANSFAC yes 118435266
chr1 203259597 203259616 PAX5 JASPAR yes 34614361
chr1 203259597 203259616 PAX5 JASPAR yes 118435267
chr1 203259635 203259649 NR2F1 JASPAR yes 34614362
chr1 203259635 203259649 NR2F1 JASPAR yes 118435268
chr1 203259637 203259641 LFA1 TRANSFAC yes 34614363
chr1 203259637 203259641 LFA1 TRANSFAC yes 118435269
chr1 203259637 203259649 INSM1 JASPAR yes 34614364
chr1 203259637 203259649 INSM1 JASPAR yes 118435270
chr1 203259644 203259655 HOXC13 JASPAR yes 34614365
chr1 203259644 203259655 HOXC13 JASPAR yes 118435271
chr1 203259647 203259650 MYB TRANSFAC yes 34614366
chr1 203259647 203259650 MYB TRANSFAC yes 118435272
chr1 203259665 203259676 E2F6 JASPAR yes 34614367
chr1 203259665 203259676 E2F6 JASPAR yes 118435273
chr1 203259669 203259680 E2F4 JASPAR yes 34614368
chr1 203259669 203259680 E2F6 JASPAR yes 34614369
chr1 203259669 203259680 E2F4 JASPAR yes 118435274
chr1 203259669 203259680 E2F6 JASPAR yes 118435275
chr1 203259670 203259681 E2F1 JASPAR yes 34614370
chr1 203259670 203259681 E2F1 JASPAR yes 118435276
chr1 203259675 203259687 HES7 JASPAR yes 34614371
chr1 203259675 203259687 PKNOX2 JASPAR yes 34614372
chr1 203259675 203259687 HES7 JASPAR yes 118435277
chr1 203259675 203259687 PKNOX2 JASPAR yes 118435278
chr1 203259677 203259686 SNAI2 JASPAR yes 34614373
chr1 203259677 203259686 SNAI2 JASPAR yes 118435279
chr1 203259677 203259697 RREB1 JASPAR yes 34614374
chr1 203259677 203259697 RREB1 JASPAR yes 118435280
chr1 203259678 203259683 USF2 TRANSFAC yes 34614375
chr1 203259678 203259683 USF2 TRANSFAC yes 118435281
chr1 203259681 203259702 ZNF263 JASPAR yes 34614376
chr1 203259681 203259702 ZNF263 JASPAR yes 118435282
chr1 203259684 203259704 RREB1 JASPAR yes 34614377
chr1 203259684 203259704 RREB1 JASPAR yes 118435283
chr1 203259693 203259704 E2F6 JASPAR yes 34614378
chr1 203259693 203259704 E2F6 JASPAR yes 118435284
chr1 203259697 203259708 E2F4 JASPAR yes 34614379
chr1 203259697 203259708 E2F6 JASPAR yes 34614380
chr1 203259697 203259708 E2F4 JASPAR yes 118435285
chr1 203259697 203259708 E2F6 JASPAR yes 118435286
chr1 203259698 203259709 E2F1 JASPAR yes 34614381
chr1 203259698 203259709 E2F1 JASPAR yes 118435287
chr1 203259728 203259738 RELA JASPAR yes 34614382
chr1 203259728 203259738 REL JASPAR yes 34614383
chr1 203259728 203259738 RELA JASPAR yes 118435288
chr1 203259728 203259738 REL JASPAR yes 118435289
chr1 203259728 203259739 NFKB1 JASPAR yes 34614384
chr1 203259728 203259739 NFKB1 JASPAR yes 118435290
chr1 203259732 203259743 E2F4 JASPAR yes 34614385
chr1 203259732 203259743 E2F6 JASPAR yes 34614386
chr1 203259732 203259743 E2F4 JASPAR yes 118435291
chr1 203259732 203259743 E2F6 JASPAR yes 118435292
chr1 203259733 203259740 E2F1 TRANSFAC yes 34614387
chr1 203259733 203259740 E2F1 TRANSFAC yes 118435293
chr1 203259733 203259741 E2F1 JASPAR yes 34614388
chr1 203259733 203259741 E2F1 JASPAR yes 118435294
chr1 203259733 203259744 E2F1 JASPAR yes 34614389
chr1 203259733 203259744 E2F1 JASPAR yes 118435295
chr1 203259735 203259754 CTCF JASPAR yes 34614390
chr1 203259735 203259754 CTCF JASPAR yes 118435296
chr1 203259739 203259750 E2F4 JASPAR yes 34614391
chr1 203259739 203259750 E2F6 JASPAR yes 34614392
chr1 203259739 203259750 E2F4 JASPAR yes 118435297
chr1 203259739 203259750 E2F6 JASPAR yes 118435298
chr1 203259752 203259766 CREB3 JASPAR yes 34614393
chr1 203259752 203259766 CREB3L1 JASPAR yes 34614394
chr1 203259752 203259766 CREB3 JASPAR yes 118435299
chr1 203259752 203259766 CREB3L1 JASPAR yes 118435300
chr1 203259753 203259767 XBP1 JASPAR yes 34614395
chr1 203259753 203259767 XBP1 JASPAR yes 118435301
chr1 203259755 203259760 ATF1 TRANSFAC yes 34614396
chr1 203259755 203259760 ATF1 TRANSFAC yes 118435302
chr1 203259786 203259796 NHLH1 JASPAR yes 34614397
chr1 203259786 203259796 NHLH1 JASPAR yes 118435303
chr1 203259789 203259804 STAT1 JASPAR yes 34614398
chr1 203259789 203259804 STAT1 JASPAR yes 118435304
chr1 203259791 203259802 STAT1 JASPAR yes 34614399
chr1 203259791 203259802 STAT3 JASPAR yes 34614400
chr1 203259791 203259802 STAT1 JASPAR yes 118435305
chr1 203259791 203259802 STAT3 JASPAR yes 118435306
chr1 203259796 203259801 ETS2 TRANSFAC yes 34614401
chr1 203259796 203259801 ETS2 TRANSFAC yes 118435307
chr1 203259803 203259821 SRF JASPAR yes 34614402
chr1 203259803 203259821 SRF JASPAR yes 118435308
chr1 203259805 203259821 SRF JASPAR yes 34614403
chr1 203259805 203259821 SRF JASPAR yes 118435309
chr1 203259805 203259823 SRF JASPAR yes 34614404
chr1 203259805 203259823 SRF JASPAR yes 118435310
chr1 203259806 203259818 SRF JASPAR yes 34614405
chr1 203259806 203259818 SRF JASPAR yes 118435311
chr1 203259808 203259817 SRF TRANSFAC yes 34614406
chr1 203259808 203259817 SRF TRANSFAC yes 118435312
chr1 203259808 203259820 SRF JASPAR yes 34614407
chr1 203259808 203259820 SRF JASPAR yes 118435313
chr1 203259816 203259820 LFA1 TRANSFAC yes 34614408
chr1 203259816 203259820 LFA1 TRANSFAC yes 118435314
chr1 203259832 203259837 SP1 TRANSFAC yes 34614409
chr1 203259832 203259837 SP1 TRANSFAC yes 118435315
chr1 203259832 203259839 SP1 TRANSFAC yes 34614410
chr1 203259832 203259839 SP1 TRANSFAC yes 118435316
chr1 203259834 203259847 TFAP2A JASPAR yes 34614411
chr1 203259834 203259847 TFAP2B JASPAR yes 34614412
chr1 203259834 203259847 TFAP2C JASPAR yes 34614413
chr1 203259834 203259847 TFAP2A JASPAR yes 118435317
chr1 203259834 203259847 TFAP2B JASPAR yes 118435318
chr1 203259834 203259847 TFAP2C JASPAR yes 118435319
chr1 203259842 203259846 LFA1 TRANSFAC yes 34614414
chr1 203259842 203259846 LFA1 TRANSFAC yes 118435320
chr1 203259847 203259861 PLAG1 JASPAR yes 34614415
chr1 203259847 203259861 PLAG1 JASPAR yes 118435321
chr1 203259857 203259862 TFAP2A TRANSFAC yes 34614416
chr1 203259857 203259862 TFAP2A TRANSFAC yes 118435322
chr1 203259857 203259863 MZF1 JASPAR yes 34614417
chr1 203259857 203259863 MZF1 JASPAR yes 118435323
chr1 203259859 203259865 MAZ TRANSFAC yes 34614418
chr1 203259859 203259865 MAZ TRANSFAC yes 118435324
chr1 203259863 203259867 LFA1 TRANSFAC yes 34614419
chr1 203259863 203259867 LFA1 TRANSFAC yes 118435325
chr1 203259863 203259876 SCRT2 JASPAR yes 34614420
chr1 203259863 203259876 SCRT2 JASPAR yes 118435326
chr1 203259866 203259879 ZBTB18 JASPAR yes 34614421
chr1 203259866 203259879 ZBTB18 JASPAR yes 118435327
chr1 203259867 203259877 MSC JASPAR yes 34614422
chr1 203259867 203259877 MYF6 JASPAR yes 34614423
chr1 203259867 203259877 NHLH1 JASPAR yes 34614424
chr1 203259867 203259877 TFAP4 JASPAR yes 34614425
chr1 203259867 203259877 MSC JASPAR yes 118435328
chr1 203259867 203259877 MYF6 JASPAR yes 118435329
chr1 203259867 203259877 NHLH1 JASPAR yes 118435330
chr1 203259867 203259877 TFAP4 JASPAR yes 118435331
chr1 203259870 203259883 SMAD2 JASPAR yes 34614426
chr1 203259870 203259883 SMAD2 JASPAR yes 118435332
chr1 203259878 203259884 YY1 JASPAR yes 34614427
chr1 203259878 203259884 YY1 JASPAR yes 118435333
chr1 203259884 203259902 ESR2 JASPAR yes 34614428
chr1 203259884 203259902 ESR2 JASPAR yes 118435334
chr1 203259886 203259906 ESR1 JASPAR yes 34614429
chr1 203259886 203259906 ESR1 JASPAR yes 118435335
chr1 203259906 203259915 SOX9 JASPAR yes 34614430
chr1 203259906 203259915 SOX9 JASPAR yes 118435336
chr1 203259911 203259920 HIC2 JASPAR yes 34614431
chr1 203259911 203259920 HIC2 JASPAR yes 118435337
chr1 203259920 203259935 NR2C2 JASPAR yes 34614432
chr1 203259920 203259935 NR2C2 JASPAR yes 118435338
chr1 203259921 203259935 RXRB JASPAR yes 34614433
chr1 203259921 203259935 RXRG JASPAR yes 34614434
chr1 203259921 203259935 RXRB JASPAR yes 118435339
chr1 203259921 203259935 RXRG JASPAR yes 118435340
chr1 203259923 203259927 LFA1 TRANSFAC yes 34614435
chr1 203259923 203259927 LFA1 TRANSFAC yes 118435341
chr1 203259923 203259938 ESR2 JASPAR yes 34614436
chr1 203259923 203259938 ESR2 JASPAR yes 118435342
chr1 203259933 203259943 GCM2 JASPAR yes 34614437
chr1 203259933 203259943 GCM2 JASPAR yes 118435343
chr1 203259939 203259943 YY1 TRANSFAC yes 34614438
chr1 203259939 203259943 YY1 TRANSFAC yes 118435344
chr1 203259943 203259950 NFATC2 JASPAR yes 34614439
chr1 203259943 203259950 NFATC2 JASPAR yes 118435345
chr1 203259965 203259969 NFE TRANSFAC yes 34614440
chr1 203259965 203259969 NFE TRANSFAC yes 118435346
SNP sites on vista4627[chr1:203259429-203259985]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 203259445 rs540049403 T C
POLR2A YY1
866436
chr1 203259490 rs115090485 C A
POLR2A SP1
866437
chr1 203259677 rs530459650 G C
E2F1 E2F4 E2F6 EGR1 ELK1 HES7 PKNOX2 POLR2A RREB1 SNAI2 SRF
866438
chr1 203259691 rs139025601 A G
E2F6 EGR1 ELK1 POLR2A RREB1 SRF ZNF263
866439
chr1 203259704 rs12095315 C A,G
E2F1 E2F4 E2F6 EGR1 ELK1 ELK4 POLR2A RREB1 SRF
866440
chr1 203259923 rs143039636 G C
ELK1 ELK4 ESR2 LFA1 NR2C2 POLR2A RXRB RXRG SRF
866441
Genes possibly regulated by vista4627[chr1:203259429-203259985]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 203181955 203242769 - CHIT1 ENSG00000133063.11 203242769 0.97 0.99 1736 83340
chr1 203274619 203278730 + BTG2 ENSG00000159388.5 203274619 0.77 0.99 1737 85366
chr1 203309756 203320617 - FMOD ENSG00000122176.10 203320617 0.85 0.99 1738 39368
Expression level of Genes
Back to top
miRNAs possibly regulated by vista4627[chr1:203259429-203259985]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results