EnhancerDB
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  3. rs143039636[chr1:203259923]
Enhancers that have rs143039636[chr1:203259923]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203242209 203262675 enh881
Bone Marrow (K562) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 203259429 203259985 vista4627
VISTA
Transcript factors that have rs143039636[chr1:203259923]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203258229 203260240 POLR2A UCSC Txn Factor no Conserved 107858338
chr1 203258229 203260240 POLR2A UCSC Txn Factor no Conserved 107858339
chr1 203259419 203260240 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107858432
chr1 203259467 203259923 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21367973
chr1 203259467 203259923 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107858435
chr1 203259488 203259984 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21367977
chr1 203259488 203259984 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107858441
chr1 203259505 203259961 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21367981
chr1 203259505 203259961 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107858445
chr1 203259529 203259965 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367985
chr1 203259529 203259965 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858449
chr1 203259559 203259923 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367991
chr1 203259559 203259923 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858455
chr1 203259606 203259986 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21367995
chr1 203259606 203259986 ELK1 UCSC Txn Factor no Conserved 107858460
chr1 203259606 203259986 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107858461
chr1 203259608 203259932 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107858464
chr1 203259651 203259991 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21368000
chr1 203259651 203259991 SRF UCSC Txn Factor no Conserved 107858468
chr1 203259651 203259991 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858469
chr1 203259680 203259944 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107858471
chr1 203259690 203260054 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107858472
chr1 203259690 203260066 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107858473
chr1 203259692 203260272 ELK4 UCSC Txn Factor no Conserved 107858475
chr1 203259697 203259934 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21368002
chr1 203259697 203259934 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107858476
chr1 203259717 203260065 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107858478
chr1 203259717 203260146 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107858479
chr1 203259890 203260266 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107858481
chr1 203259920 203259935 NR2C2 JASPAR yes 34614432
chr1 203259920 203259935 NR2C2 JASPAR yes 118435338
chr1 203259921 203259935 RXRB JASPAR yes 34614433
chr1 203259921 203259935 RXRG JASPAR yes 34614434
chr1 203259921 203259935 RXRB JASPAR yes 118435339
chr1 203259921 203259935 RXRG JASPAR yes 118435340
chr1 203259923 203259927 LFA1 TRANSFAC yes 34614435
chr1 203259923 203259927 LFA1 TRANSFAC yes 118435341
chr1 203259923 203259938 ESR2 JASPAR yes 34614436
chr1 203259923 203259938 ESR2 JASPAR yes 118435342
Genes associated with rs143039636[chr1:203259923], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More