EnhancerDB
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  3. rs540049403[chr1:203259445]
Enhancers that have rs540049403[chr1:203259445]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203242209 203262675 enh881
Bone Marrow (K562) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 203259429 203259985 vista4627
VISTA
Transcript factors that have rs540049403[chr1:203259445]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203258229 203259832 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367893
chr1 203258229 203259832 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858336
chr1 203258229 203259832 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858337
chr1 203258229 203260240 POLR2A UCSC Txn Factor no Conserved 107858338
chr1 203258229 203260240 POLR2A UCSC Txn Factor no Conserved 107858339
chr1 203259172 203259572 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367969
chr1 203259172 203259572 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858429
chr1 203259172 203259572 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858430
chr1 203259414 203259794 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367970
chr1 203259414 203259794 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858431
chr1 203259419 203260240 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107858432
chr1 203259438 203259762 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367971
chr1 203259438 203259762 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858433
chr1 203259441 203259445 YY1 TRANSFAC yes 34614328
chr1 203259441 203259445 YY1 TRANSFAC yes 118435234
Genes associated with rs540049403[chr1:203259445], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More