EnhancerDB
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  3. vista4640[chr1:203491011-203491485]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4640[chr1:203491011-203491485]
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Tissue distribution of vista4640
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Transcription factor that possibly regulate vista4640[chr1:203491011-203491485]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 203491011 203491016 TFAP2A TRANSFAC yes 34635075
chr1 203491011 203491016 TFAP2A TRANSFAC yes 118436050
chr1 203491011 203491017 MZF1 JASPAR yes 34635076
chr1 203491011 203491017 MZF1 JASPAR yes 118436051
chr1 203491013 203491025 HINFP JASPAR yes 34635077
chr1 203491013 203491025 HINFP JASPAR yes 118436052
chr1 203491028 203491049 ZNF263 JASPAR yes 34635078
chr1 203491028 203491049 ZNF263 JASPAR yes 118436053
chr1 203491031 203491052 ZNF263 JASPAR yes 34635079
chr1 203491031 203491052 ZNF263 JASPAR yes 118436054
chr1 203491032 203491042 ZNF740 JASPAR yes 34635080
chr1 203491032 203491042 ZNF740 JASPAR yes 118436055
chr1 203491039 203491043 LFA1 TRANSFAC yes 34635081
chr1 203491039 203491043 LFA1 TRANSFAC yes 118436056
chr1 203491049 203491060 NFKB1 JASPAR yes 34635082
chr1 203491049 203491060 NFKB1 JASPAR yes 118436057
chr1 203491054 203491069 ZIC3 JASPAR yes 34635083
chr1 203491054 203491069 ZIC3 JASPAR yes 118436058
chr1 203491061 203491069 MGA JASPAR yes 34635084
chr1 203491061 203491069 MGA JASPAR yes 118436059
chr1 203491087 203491106 CTCF JASPAR yes 34635085
chr1 203491087 203491106 CTCF JASPAR yes 118436060
chr1 203491119 203491129 NFATC3 JASPAR yes 34635086
chr1 203491119 203491129 NFATC3 JASPAR yes 118436061
chr1 203491121 203491128 NFATC2 JASPAR yes 34635087
chr1 203491121 203491128 NFATC2 JASPAR yes 118436062
chr1 203491127 203491136 RUNX2 JASPAR yes 34635088
chr1 203491127 203491136 RUNX2 JASPAR yes 118436063
chr1 203491141 203491157 GLIS1 JASPAR yes 34635089
chr1 203491141 203491157 GLIS1 JASPAR yes 118436064
chr1 203491147 203491158 E2F6 JASPAR yes 34635090
chr1 203491147 203491158 E2F6 JASPAR yes 118436065
chr1 203491150 203491161 NFKB1 JASPAR yes 34635091
chr1 203491150 203491161 NFKB1 JASPAR yes 118436066
chr1 203491151 203491156 ETS2 TRANSFAC yes 34635092
chr1 203491151 203491156 ETS2 TRANSFAC yes 118436067
chr1 203491151 203491161 RELA JASPAR yes 34635093
chr1 203491151 203491161 RELA JASPAR yes 118436068
chr1 203491169 203491190 ZNF263 JASPAR yes 34635094
chr1 203491169 203491190 ZNF263 JASPAR yes 118436069
chr1 203491172 203491193 ZNF263 JASPAR yes 34635095
chr1 203491172 203491193 ZNF263 JASPAR yes 118436070
chr1 203491173 203491190 RXRA JASPAR yes 34635096
chr1 203491173 203491190 RXRA JASPAR yes 118436071
chr1 203491173 203491194 ZNF263 JASPAR yes 34635097
chr1 203491173 203491194 ZNF263 JASPAR yes 118436072
chr1 203491176 203491197 ZNF263 JASPAR yes 34635098
chr1 203491176 203491197 ZNF263 JASPAR yes 118436073
chr1 203491177 203491198 ZNF263 JASPAR yes 34635099
chr1 203491177 203491198 ZNF263 JASPAR yes 118436074
chr1 203491182 203491203 ZNF263 JASPAR yes 34635100
chr1 203491182 203491203 ZNF263 JASPAR yes 118436075
chr1 203491208 203491218 SP1 JASPAR yes 34635101
chr1 203491208 203491218 SP1 JASPAR yes 118436076
chr1 203491209 203491229 RREB1 JASPAR yes 34635102
chr1 203491209 203491229 RREB1 JASPAR yes 118436077
chr1 203491213 203491233 RREB1 JASPAR yes 34635103
chr1 203491213 203491233 RREB1 JASPAR yes 118436078
chr1 203491214 203491226 FOXI1 JASPAR yes 34635104
chr1 203491214 203491226 FOXI1 JASPAR yes 118436079
chr1 203491215 203491230 RUNX2 JASPAR yes 34635105
chr1 203491215 203491230 RUNX2 JASPAR yes 118436080
chr1 203491219 203491229 RUNX3 JASPAR yes 34635106
chr1 203491219 203491229 RUNX3 JASPAR yes 118436081
chr1 203491250 203491265 TFAP2C JASPAR yes 34635107
chr1 203491250 203491265 TFAP2C JASPAR yes 118436082
chr1 203491251 203491260 TFAP2A JASPAR yes 34635108
chr1 203491251 203491260 TFAP2A JASPAR yes 118436083
chr1 203491251 203491262 EBF1 JASPAR yes 34635109
chr1 203491251 203491262 EBF1 JASPAR yes 118436084
chr1 203491255 203491260 TFAP2A TRANSFAC yes 34635110
chr1 203491255 203491260 TFAP2A TRANSFAC yes 118436085
chr1 203491255 203491261 MZF1 JASPAR yes 34635111
chr1 203491255 203491261 MZF1 JASPAR yes 118436086
chr1 203491261 203491270 ZEB1 JASPAR yes 34635112
chr1 203491261 203491270 ZEB1 JASPAR yes 118436087
chr1 203491264 203491269 USF2 TRANSFAC yes 34635113
chr1 203491264 203491269 USF2 TRANSFAC yes 118436088
chr1 203491276 203491296 ESR1 JASPAR yes 34635114
chr1 203491276 203491296 ESR1 JASPAR yes 118436089
chr1 203491278 203491298 PPARG JASPAR yes 34635115
chr1 203491278 203491298 PPARG JASPAR yes 118436090
chr1 203491279 203491299 PPARG JASPAR yes 34635116
chr1 203491279 203491299 PPARG JASPAR yes 118436091
chr1 203491280 203491297 ESR1 JASPAR yes 34635117
chr1 203491280 203491297 ESR1 JASPAR yes 118436092
chr1 203491280 203491298 ESR2 JASPAR yes 34635118
chr1 203491280 203491298 ESR2 JASPAR yes 118436093
chr1 203491281 203491296 ESR2 JASPAR yes 34635119
chr1 203491281 203491296 ESR2 JASPAR yes 118436094
chr1 203491282 203491286 H4TF2 TRANSFAC yes 34635120
chr1 203491282 203491286 H4TF2 TRANSFAC yes 118436095
chr1 203491300 203491310 ID4 JASPAR yes 34635121
chr1 203491300 203491310 TCF3 JASPAR yes 34635122
chr1 203491300 203491310 TCF4 JASPAR yes 34635123
chr1 203491300 203491310 ID4 JASPAR yes 118436096
chr1 203491300 203491310 TCF3 JASPAR yes 118436097
chr1 203491300 203491310 TCF4 JASPAR yes 118436098
chr1 203491301 203491310 SNAI2 JASPAR yes 34635124
chr1 203491301 203491310 SNAI2 JASPAR yes 118436099
chr1 203491302 203491307 USF2 TRANSFAC yes 34635125
chr1 203491302 203491307 USF2 TRANSFAC yes 118436100
chr1 203491305 203491309 NFE TRANSFAC yes 34635126
chr1 203491305 203491309 NFE TRANSFAC yes 118436101
chr1 203491306 203491321 TFAP2A JASPAR yes 34635127
chr1 203491306 203491321 TFAP2C JASPAR yes 34635128
chr1 203491306 203491321 TFAP2A JASPAR yes 118436102
chr1 203491306 203491321 TFAP2C JASPAR yes 118436103
chr1 203491312 203491317 SP1 TRANSFAC yes 34635129
chr1 203491312 203491317 SP1 TRANSFAC yes 118436104
chr1 203491314 203491327 TFAP2A JASPAR yes 34635130
chr1 203491314 203491327 TFAP2B JASPAR yes 34635131
chr1 203491314 203491327 TFAP2C JASPAR yes 34635132
chr1 203491314 203491327 TFAP2A JASPAR yes 118436105
chr1 203491314 203491327 TFAP2B JASPAR yes 118436106
chr1 203491314 203491327 TFAP2C JASPAR yes 118436107
chr1 203491314 203491329 TFAP2C JASPAR yes 34635133
chr1 203491314 203491329 TFAP2C JASPAR yes 118436108
chr1 203491315 203491326 EBF1 JASPAR yes 34635134
chr1 203491315 203491326 EBF1 JASPAR yes 118436109
chr1 203491329 203491337 FOXO3 JASPAR yes 34635135
chr1 203491329 203491337 FOXO3 JASPAR yes 118436110
chr1 203491335 203491344 SOX9 JASPAR yes 34635136
chr1 203491335 203491344 SOX9 JASPAR yes 118436111
chr1 203491384 203491387 MYB TRANSFAC yes 34635137
chr1 203491384 203491387 MYB TRANSFAC yes 118436112
chr1 203491390 203491396 NFIC JASPAR yes 34635138
chr1 203491390 203491396 NFIC JASPAR yes 118436113
chr1 203491392 203491402 NHLH1 JASPAR yes 34635139
chr1 203491392 203491402 NHLH1 JASPAR yes 118436114
chr1 203491405 203491419 POU1F1 JASPAR yes 34635140
chr1 203491405 203491419 POU1F1 JASPAR yes 118436115
chr1 203491406 203491419 POU3F3 JASPAR yes 34635141
chr1 203491406 203491419 POU3F3 JASPAR yes 118436116
chr1 203491409 203491416 NKX3-1 JASPAR yes 34635142
chr1 203491409 203491416 NKX3-1 JASPAR yes 118436117
chr1 203491413 203491417 TEAD2 TRANSFAC yes 34635143
chr1 203491413 203491417 TEAD2 TRANSFAC yes 118436118
chr1 203491425 203491429 YY1 TRANSFAC yes 34635144
chr1 203491425 203491429 YY1 TRANSFAC yes 118436119
chr1 203491468 203491481 DUXA JASPAR yes 34635145
chr1 203491468 203491481 DUXA JASPAR yes 118436120
chr1 203491469 203491480 PROP1 JASPAR yes 34635146
chr1 203491469 203491480 PROP1 JASPAR yes 118436121
SNP sites on vista4640[chr1:203491011-203491485]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 203491089 rs4448573 A G
CTCF
868873
chr1 203491150 rs4971239 G A
E2F6 GLIS1 NFKB1
868874
chr1 203491172 rs117467888 A T
ZNF263
868875
chr1 203491191 rs74139929 C A
ZNF263
868876
chr1 203491288 rs543228960 C A,T
ESR1 ESR2 PPARG
868877
chr1 203491324 rs74139930 G A,T
EBF1 TFAP2A TFAP2B TFAP2C
868878
chr1 203491341 rs138084899 A G
SOX9
868879
chr1 203491367 rs541818846 T C no 868880
chr1 203491392 rs4971212 T G
NFIC NHLH1
868881
chr1 203491458 rs149543211 C G no 868882
Genes possibly regulated by vista4640[chr1:203491011-203491485]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 203444956 203460480 + PRELP ENSG00000188783.5 203444956 0.8 0.78 1739 53945
chr1 203463271 203477992 + OPTC ENSG00000188770.5 203463271 0.94 1.0 1740 72260
Expression level of Genes
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miRNAs possibly regulated by vista4640[chr1:203491011-203491485]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results