EnhancerDB
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  3. rs543228960[chr1:203491288]
Enhancers that have rs543228960[chr1:203491288]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr1 203491011 203491485 vista4640
VISTA
Transcript factors that have rs543228960[chr1:203491288]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203491276 203491296 ESR1 JASPAR yes 34635114
chr1 203491276 203491296 ESR1 JASPAR yes 118436089
chr1 203491278 203491298 PPARG JASPAR yes 34635115
chr1 203491278 203491298 PPARG JASPAR yes 118436090
chr1 203491279 203491299 PPARG JASPAR yes 34635116
chr1 203491279 203491299 PPARG JASPAR yes 118436091
chr1 203491280 203491297 ESR1 JASPAR yes 34635117
chr1 203491280 203491297 ESR1 JASPAR yes 118436092
chr1 203491280 203491298 ESR2 JASPAR yes 34635118
chr1 203491280 203491298 ESR2 JASPAR yes 118436093
chr1 203491281 203491296 ESR2 JASPAR yes 34635119
chr1 203491281 203491296 ESR2 JASPAR yes 118436094
Genes associated with rs543228960[chr1:203491288], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More