EnhancerDB
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  3. rs74139930[chr1:203491324]
Enhancers that have rs74139930[chr1:203491324]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr1 203491011 203491485 vista4640
VISTA
Transcript factors that have rs74139930[chr1:203491324]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203491314 203491327 TFAP2A JASPAR yes 34635130
chr1 203491314 203491327 TFAP2B JASPAR yes 34635131
chr1 203491314 203491327 TFAP2C JASPAR yes 34635132
chr1 203491314 203491327 TFAP2A JASPAR yes 118436105
chr1 203491314 203491327 TFAP2B JASPAR yes 118436106
chr1 203491314 203491327 TFAP2C JASPAR yes 118436107
chr1 203491314 203491329 TFAP2C JASPAR yes 34635133
chr1 203491314 203491329 TFAP2C JASPAR yes 118436108
chr1 203491315 203491326 EBF1 JASPAR yes 34635134
chr1 203491315 203491326 EBF1 JASPAR yes 118436109
Genes associated with rs74139930[chr1:203491324], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More