EnhancerDB
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  3. vista4670[chr1:204058173-204058362]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4670[chr1:204058173-204058362]
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Tissue distribution of vista4670
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Transcription factor that possibly regulate vista4670[chr1:204058173-204058362]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 204058137 204058452 NR3C1 UCSC Txn Factor no Conserved 107859623
chr1 204058173 204058194 ZNF263 JASPAR yes 34678186
chr1 204058173 204058194 ZNF263 JASPAR yes 118437432
chr1 204058178 204058199 ZNF263 JASPAR yes 34678187
chr1 204058178 204058199 ZNF263 JASPAR yes 118437433
chr1 204058188 204058198 GABPA JASPAR yes 34678188
chr1 204058188 204058198 GABPA JASPAR yes 118437434
chr1 204058189 204058194 ETS2 TRANSFAC yes 34678189
chr1 204058189 204058194 ETS2 TRANSFAC yes 118437435
chr1 204058211 204058222 PROP1 JASPAR yes 34678190
chr1 204058211 204058222 PROP1 JASPAR yes 118437436
chr1 204058246 204058257 HOXA10 JASPAR yes 34678191
chr1 204058246 204058257 HOXA10 JASPAR yes 118437437
chr1 204058247 204058256 CDX1 JASPAR yes 34678192
chr1 204058247 204058256 CDX1 JASPAR yes 118437438
chr1 204058247 204058258 CDX2 JASPAR yes 34678193
chr1 204058247 204058258 CDX2 JASPAR yes 118437439
chr1 204058252 204058265 ELF3 JASPAR yes 34678194
chr1 204058252 204058265 ELF3 JASPAR yes 118437440
chr1 204058253 204058263 ETV3 JASPAR yes 34678195
chr1 204058253 204058263 ETV4 JASPAR yes 34678196
chr1 204058253 204058263 ETV5 JASPAR yes 34678197
chr1 204058253 204058263 ETV3 JASPAR yes 118437441
chr1 204058253 204058263 ETV4 JASPAR yes 118437442
chr1 204058253 204058263 ETV5 JASPAR yes 118437443
chr1 204058253 204058264 ELF5 JASPAR yes 34678198
chr1 204058253 204058264 SPDEF JASPAR yes 34678199
chr1 204058253 204058264 ELF5 JASPAR yes 118437444
chr1 204058253 204058264 SPDEF JASPAR yes 118437445
chr1 204058253 204058265 EHF JASPAR yes 34678200
chr1 204058253 204058265 ELF1 JASPAR yes 34678201
chr1 204058253 204058265 ELF4 JASPAR yes 34678202
chr1 204058253 204058265 EHF JASPAR yes 118437446
chr1 204058253 204058265 ELF1 JASPAR yes 118437447
chr1 204058253 204058265 ELF4 JASPAR yes 118437448
chr1 204058254 204058263 ELK4 JASPAR yes 34678203
chr1 204058254 204058263 ELK4 JASPAR yes 118437449
chr1 204058272 204058287 AR JASPAR yes 34678204
chr1 204058272 204058287 AR JASPAR yes 118437450
chr1 204058272 204058289 NR3C1 JASPAR yes 34678205
chr1 204058272 204058289 NR3C2 JASPAR yes 34678206
chr1 204058272 204058289 NR3C1 JASPAR yes 118437451
chr1 204058272 204058289 NR3C2 JASPAR yes 118437452
chr1 204058274 204058289 AR JASPAR yes 34678207
chr1 204058274 204058289 AR JASPAR yes 118437453
chr1 204058296 204058317 ZNF263 JASPAR yes 34678208
chr1 204058296 204058317 ZNF263 JASPAR yes 118437454
chr1 204058298 204058303 ETS2 TRANSFAC yes 34678209
chr1 204058298 204058303 ETS2 TRANSFAC yes 118437455
chr1 204058299 204058320 ZNF263 JASPAR yes 34678210
chr1 204058299 204058320 ZNF263 JASPAR yes 118437456
chr1 204058300 204058321 ZNF263 JASPAR yes 34678211
chr1 204058300 204058321 ZNF263 JASPAR yes 118437457
chr1 204058303 204058324 ZNF263 JASPAR yes 34678212
chr1 204058303 204058324 ZNF263 JASPAR yes 118437458
chr1 204058308 204058318 ZNF740 JASPAR yes 34678213
chr1 204058308 204058318 ZNF740 JASPAR yes 118437459
chr1 204058310 204058320 ZNF740 JASPAR yes 34678214
chr1 204058310 204058320 ZNF740 JASPAR yes 118437460
chr1 204058311 204058321 SP1 JASPAR yes 34678215
chr1 204058311 204058321 SP1 JASPAR yes 118437461
chr1 204058312 204058322 SP1 JASPAR yes 34678216
chr1 204058312 204058322 SP1 JASPAR yes 118437462
chr1 204058315 204058320 SP1 TRANSFAC yes 34678217
chr1 204058315 204058320 SP1 TRANSFAC yes 118437463
chr1 204058317 204058322 TFAP2A TRANSFAC yes 34678218
chr1 204058317 204058322 TFAP2A TRANSFAC yes 118437464
chr1 204058317 204058323 MZF1 JASPAR yes 34678219
chr1 204058317 204058323 MZF1 JASPAR yes 118437465
chr1 204058319 204058324 ETS2 TRANSFAC yes 34678220
chr1 204058319 204058324 ETS2 TRANSFAC yes 118437466
chr1 204058320 204058341 ZNF263 JASPAR yes 34678221
chr1 204058320 204058341 ZNF263 JASPAR yes 118437467
chr1 204058323 204058344 ZNF263 JASPAR yes 34678222
chr1 204058323 204058344 ZNF263 JASPAR yes 118437468
chr1 204058324 204058345 ZNF263 JASPAR yes 34678223
chr1 204058324 204058345 ZNF263 JASPAR yes 118437469
chr1 204058331 204058342 ETV2 JASPAR yes 34678224
chr1 204058331 204058342 ETV2 JASPAR yes 118437470
chr1 204058332 204058343 FLI1 JASPAR yes 34678225
chr1 204058332 204058343 FLI1 JASPAR yes 118437471
chr1 204058351 204058367 SOX4 JASPAR yes 34678226
chr1 204058351 204058367 SOX4 JASPAR yes 118437472
chr1 204058356 204058366 HOXC10 JASPAR yes 34678227
chr1 204058356 204058366 HOXD11 JASPAR yes 34678228
chr1 204058356 204058366 HOXD13 JASPAR yes 34678229
chr1 204058356 204058366 HOXC10 JASPAR yes 118437473
chr1 204058356 204058366 HOXD11 JASPAR yes 118437474
chr1 204058356 204058366 HOXD13 JASPAR yes 118437475
chr1 204058356 204058367 HOXA10 JASPAR yes 34678230
chr1 204058356 204058367 HOXC11 JASPAR yes 34678231
chr1 204058356 204058367 HOXC12 JASPAR yes 34678232
chr1 204058356 204058367 HOXD12 JASPAR yes 34678233
chr1 204058356 204058367 HOXA10 JASPAR yes 118437476
chr1 204058356 204058367 HOXC11 JASPAR yes 118437477
chr1 204058356 204058367 HOXC12 JASPAR yes 118437478
chr1 204058356 204058367 HOXD12 JASPAR yes 118437479
chr1 204058357 204058366 CDX1 JASPAR yes 34678234
chr1 204058357 204058366 CDX1 JASPAR yes 118437480
chr1 204058357 204058368 CDX2 JASPAR yes 34678235
chr1 204058357 204058368 CDX2 JASPAR yes 118437481
chr1 204058358 204058369 BATF JASPAR yes 34678236
chr1 204058358 204058369 BATF JASPAR yes 118437482
SNP sites on vista4670[chr1:204058173-204058362]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 204058256 rs139033195 C T
CDX1 CDX2 EHF ELF1 ELF3 ELF4 ELF5 ELK4 ETV3 ETV4 ETV5 HOXA10 NR3C1 SPDEF
873498
chr1 204058310 rs35005426 TG T
NR3C1 ZNF263 ZNF740
873499
Genes possibly regulated by vista4670[chr1:204058173-204058362]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 204042243 204096863 + SOX13 ENSG00000143842.10 204042243 0.8 1.0 1746 84070
chr1 204100190 204121307 - ETNK2 ENSG00000143845.10 204121307 0.91 1.0 1747 37055
chr1 204123944 204135465 - REN ENSG00000143839.12 204135465 0.99 1.0 1748 22897
Expression level of Genes
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miRNAs possibly regulated by vista4670[chr1:204058173-204058362]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results