EnhancerDB
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  3. rs139033195[chr1:204058256]
Enhancers that have rs139033195[chr1:204058256]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204045525 204080675 enh12573
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 204058173 204058362 vista4670
VISTA
Transcript factors that have rs139033195[chr1:204058256]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204056779 204058279 TEF1 GTRD no Bone (Osteoblast) 21370125
chr1 204056779 204058279 TEF1 GTRD no Bone (Osteoblast) 107859592
chr1 204056930 204058304 ZBTB33 GTRD no Brain (SK-N-SH) 21370126
chr1 204056930 204058304 ZBTB33 GTRD no Brain (SK-N-SH) 107859593
chr1 204056945 204058865 TCF7L2 GTRD no Colon (HCT116) 21370127
chr1 204056945 204058865 TCF7L2 GTRD no Colon (HCT116) 107859594
chr1 204056957 204058295 ZNF274 GTRD no Cervix (HeLa-S3) 21370128
chr1 204056957 204058295 ZNF274 GTRD no Cervix (HeLa-S3) 107859595
chr1 204056974 204058291 ZNF274 GTRD no Cervix (HeLa-S3) 21370129
chr1 204056974 204058291 ZNF274 GTRD no Cervix (HeLa-S3) 107859596
chr1 204057028 204058331 ZNF274 GTRD no Cervix (HeLa-S3) 21370131
chr1 204057028 204058331 ZNF274 GTRD no Cervix (HeLa-S3) 107859598
chr1 204057042 204058298 ZBTB33 GTRD no Brain (SK-N-SH) 21370132
chr1 204057042 204058298 ZBTB33 GTRD no Brain (SK-N-SH) 107859599
chr1 204057051 204058352 TCF7L2 GTRD no Colon (HCT116) 21370134
chr1 204057051 204058352 TCF7L2 GTRD no Colon (HCT116) 107859601
chr1 204057107 204058401 ZNF274 GTRD no Cervix (HeLa-S3) 21370136
chr1 204057107 204058401 ZNF274 GTRD no Cervix (HeLa-S3) 107859603
chr1 204057143 204058297 ZBTB33 GTRD no Brain (SK-N-SH) 21370137
chr1 204057143 204058297 ZBTB33 GTRD no Brain (SK-N-SH) 107859604
chr1 204057159 204058507 TCF7L2 GTRD no Colon (HCT116) 21370138
chr1 204057159 204058507 TCF7L2 GTRD no Colon (HCT116) 107859605
chr1 204057167 204058281 ZBTB33 GTRD no Lung (A549) 21370139
chr1 204057167 204058281 ZBTB33 GTRD no Lung (A549) 107859606
chr1 204057199 204058316 ZBTB33 GTRD no Brain (SK-N-SH) 21370141
chr1 204057199 204058316 ZBTB33 GTRD no Brain (SK-N-SH) 107859608
chr1 204057216 204058480 ZNF274 GTRD no Cervix (HeLa-S3) 21370142
chr1 204057216 204058480 ZNF274 GTRD no Cervix (HeLa-S3) 107859609
chr1 204057255 204058258 ZBTB33 GTRD no Brain (SK-N-SH) 21370143
chr1 204057255 204058258 ZBTB33 GTRD no Brain (SK-N-SH) 107859610
chr1 204057279 204058286 ZBTB33 GTRD no Brain (SK-N-SH) 21370145
chr1 204057279 204058286 ZBTB33 GTRD no Brain (SK-N-SH) 107859612
chr1 204057317 204058349 TCF7L2 GTRD no Colon (HCT116) 21370147
chr1 204057317 204058349 TCF7L2 GTRD no Colon (HCT116) 107859614
chr1 204057381 204058700 TCF7L2 GTRD no Colon (HCT116) 21370149
chr1 204057381 204058700 TCF7L2 GTRD no Colon (HCT116) 107859617
chr1 204058137 204058421 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21370154
chr1 204058137 204058421 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107859622
chr1 204058137 204058452 NR3C1 UCSC Txn Factor no Conserved 107859623
chr1 204058246 204058257 HOXA10 JASPAR yes 34678191
chr1 204058246 204058257 HOXA10 JASPAR yes 118437437
chr1 204058247 204058256 CDX1 JASPAR yes 34678192
chr1 204058247 204058256 CDX1 JASPAR yes 118437438
chr1 204058247 204058258 CDX2 JASPAR yes 34678193
chr1 204058247 204058258 CDX2 JASPAR yes 118437439
chr1 204058252 204058265 ELF3 JASPAR yes 34678194
chr1 204058252 204058265 ELF3 JASPAR yes 118437440
chr1 204058253 204058263 ETV3 JASPAR yes 34678195
chr1 204058253 204058263 ETV4 JASPAR yes 34678196
chr1 204058253 204058263 ETV5 JASPAR yes 34678197
chr1 204058253 204058263 ETV3 JASPAR yes 118437441
chr1 204058253 204058263 ETV4 JASPAR yes 118437442
chr1 204058253 204058263 ETV5 JASPAR yes 118437443
chr1 204058253 204058264 ELF5 JASPAR yes 34678198
chr1 204058253 204058264 SPDEF JASPAR yes 34678199
chr1 204058253 204058264 ELF5 JASPAR yes 118437444
chr1 204058253 204058264 SPDEF JASPAR yes 118437445
chr1 204058253 204058265 EHF JASPAR yes 34678200
chr1 204058253 204058265 ELF1 JASPAR yes 34678201
chr1 204058253 204058265 ELF4 JASPAR yes 34678202
chr1 204058253 204058265 EHF JASPAR yes 118437446
chr1 204058253 204058265 ELF1 JASPAR yes 118437447
chr1 204058253 204058265 ELF4 JASPAR yes 118437448
chr1 204058254 204058263 ELK4 JASPAR yes 34678203
chr1 204058254 204058263 ELK4 JASPAR yes 118437449
Genes associated with rs139033195[chr1:204058256], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More