EnhancerDB
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  3. rs35005426[chr1:204058310]
Enhancers that have rs35005426[chr1:204058310]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204045525 204080675 enh12573
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 204058173 204058362 vista4670
VISTA
Transcript factors that have rs35005426[chr1:204058310]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204056945 204058865 TCF7L2 GTRD no Colon (HCT116) 21370127
chr1 204056945 204058865 TCF7L2 GTRD no Colon (HCT116) 107859594
chr1 204057028 204058331 ZNF274 GTRD no Cervix (HeLa-S3) 21370131
chr1 204057028 204058331 ZNF274 GTRD no Cervix (HeLa-S3) 107859598
chr1 204057051 204058352 TCF7L2 GTRD no Colon (HCT116) 21370134
chr1 204057051 204058352 TCF7L2 GTRD no Colon (HCT116) 107859601
chr1 204057107 204058401 ZNF274 GTRD no Cervix (HeLa-S3) 21370136
chr1 204057107 204058401 ZNF274 GTRD no Cervix (HeLa-S3) 107859603
chr1 204057159 204058507 TCF7L2 GTRD no Colon (HCT116) 21370138
chr1 204057159 204058507 TCF7L2 GTRD no Colon (HCT116) 107859605
chr1 204057199 204058316 ZBTB33 GTRD no Brain (SK-N-SH) 21370141
chr1 204057199 204058316 ZBTB33 GTRD no Brain (SK-N-SH) 107859608
chr1 204057216 204058480 ZNF274 GTRD no Cervix (HeLa-S3) 21370142
chr1 204057216 204058480 ZNF274 GTRD no Cervix (HeLa-S3) 107859609
chr1 204057317 204058349 TCF7L2 GTRD no Colon (HCT116) 21370147
chr1 204057317 204058349 TCF7L2 GTRD no Colon (HCT116) 107859614
chr1 204057381 204058700 TCF7L2 GTRD no Colon (HCT116) 21370149
chr1 204057381 204058700 TCF7L2 GTRD no Colon (HCT116) 107859617
chr1 204058137 204058421 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21370154
chr1 204058137 204058421 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107859622
chr1 204058137 204058452 NR3C1 UCSC Txn Factor no Conserved 107859623
chr1 204058296 204058317 ZNF263 JASPAR yes 34678208
chr1 204058296 204058317 ZNF263 JASPAR yes 118437454
chr1 204058299 204058320 ZNF263 JASPAR yes 34678210
chr1 204058299 204058320 ZNF263 JASPAR yes 118437456
chr1 204058300 204058321 ZNF263 JASPAR yes 34678211
chr1 204058300 204058321 ZNF263 JASPAR yes 118437457
chr1 204058303 204058324 ZNF263 JASPAR yes 34678212
chr1 204058303 204058324 ZNF263 JASPAR yes 118437458
chr1 204058308 204058318 ZNF740 JASPAR yes 34678213
chr1 204058308 204058318 ZNF740 JASPAR yes 118437459
chr1 204058310 204058320 ZNF740 JASPAR yes 34678214
chr1 204058310 204058320 ZNF740 JASPAR yes 118437460
Genes associated with rs35005426[chr1:204058310], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More