EnhancerDB
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  3. vista4728[chr1:205254805-205255191]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4728[chr1:205254805-205255191]
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Tissue distribution of vista4728
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Transcription factor that possibly regulate vista4728[chr1:205254805-205255191]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 205254867 205255260 RUNX3 UCSC Txn Factor no Conserved 107861489
chr1 205254801 205254809 LBX1 JASPAR yes 34751507
chr1 205254801 205254809 LBX1 JASPAR yes 118440092
chr1 205254802 205254817 MEF2C JASPAR yes 34751508
chr1 205254802 205254817 MEF2C JASPAR yes 118440093
chr1 205254804 205254819 FOXP1 JASPAR yes 34751509
chr1 205254804 205254819 FOXP1 JASPAR yes 118440094
chr1 205254805 205254820 FOXP1 JASPAR yes 34751510
chr1 205254805 205254820 FOXP1 JASPAR yes 118440095
chr1 205254806 205254812 TBP TRANSFAC yes 34751511
chr1 205254806 205254812 TBP TRANSFAC yes 118440096
chr1 205254806 205254821 FOXP1 JASPAR yes 34751512
chr1 205254806 205254821 FOXP1 JASPAR yes 118440097
chr1 205254807 205254822 FOXP1 JASPAR yes 34751513
chr1 205254807 205254822 FOXP1 JASPAR yes 118440098
chr1 205254808 205254823 FOXP1 JASPAR yes 34751514
chr1 205254808 205254823 FOXP1 JASPAR yes 118440099
chr1 205254808 205254829 IRF1 JASPAR yes 34751515
chr1 205254808 205254829 IRF1 JASPAR yes 118440100
chr1 205254809 205254824 FOXP1 JASPAR yes 34751516
chr1 205254809 205254824 FOXP1 JASPAR yes 118440101
chr1 205254809 205254830 IRF1 JASPAR yes 34751517
chr1 205254809 205254830 IRF1 JASPAR yes 118440102
chr1 205254810 205254825 FOXP1 JASPAR yes 34751518
chr1 205254810 205254825 FOXP1 JASPAR yes 118440103
chr1 205254813 205254831 NR3C1 JASPAR yes 34751519
chr1 205254813 205254831 NR3C1 JASPAR yes 118440104
chr1 205254822 205254830 HOXA5 JASPAR yes 34751520
chr1 205254822 205254830 HOXA5 JASPAR yes 118440105
chr1 205254829 205254843 E2F7 JASPAR yes 34751521
chr1 205254829 205254843 E2F7 JASPAR yes 118440106
chr1 205254830 205254842 E2F8 JASPAR yes 34751522
chr1 205254830 205254842 E2F8 JASPAR yes 118440107
chr1 205254835 205254855 RREB1 JASPAR yes 34751523
chr1 205254835 205254855 RREB1 JASPAR yes 118440108
chr1 205254837 205254852 FOXP1 JASPAR yes 34751524
chr1 205254837 205254852 FOXP1 JASPAR yes 118440109
chr1 205254838 205254853 FOXP1 JASPAR yes 34751525
chr1 205254838 205254853 FOXP1 JASPAR yes 118440110
chr1 205254839 205254854 FOXP1 JASPAR yes 34751526
chr1 205254839 205254854 FOXP1 JASPAR yes 118440111
chr1 205254839 205254860 IRF1 JASPAR yes 34751527
chr1 205254839 205254860 IRF1 JASPAR yes 118440112
chr1 205254840 205254855 FOXP1 JASPAR yes 34751528
chr1 205254840 205254855 FOXP1 JASPAR yes 118440113
chr1 205254843 205254858 STAT2 JASPAR yes 34751529
chr1 205254843 205254858 STAT2 JASPAR yes 118440114
chr1 205254852 205254866 PAX6 JASPAR yes 34751530
chr1 205254852 205254866 PAX6 JASPAR yes 118440115
chr1 205254857 205254867 TBR1 JASPAR yes 34751531
chr1 205254857 205254867 TBR1 JASPAR yes 118440116
chr1 205254892 205254903 TBX20 JASPAR yes 34751532
chr1 205254892 205254903 TBX20 JASPAR yes 118440117
chr1 205254893 205254901 TBX15 JASPAR yes 34751533
chr1 205254893 205254901 TBX15 JASPAR yes 118440118
chr1 205254893 205254904 E2F6 JASPAR yes 34751534
chr1 205254893 205254904 E2F6 JASPAR yes 118440119
chr1 205254894 205254899 SP1 TRANSFAC yes 34751535
chr1 205254894 205254899 SP1 TRANSFAC yes 118440120
chr1 205254897 205254902 ETS2 TRANSFAC yes 34751536
chr1 205254897 205254902 ETS2 TRANSFAC yes 118440121
chr1 205254917 205254932 LEF1 JASPAR yes 34751537
chr1 205254917 205254932 LEF1 JASPAR yes 118440122
chr1 205254962 205254976 MTF1 JASPAR yes 34751538
chr1 205254962 205254976 MTF1 JASPAR yes 118440123
chr1 205254966 205254976 SREBF1 JASPAR yes 34751539
chr1 205254966 205254976 SREBF2 JASPAR yes 34751540
chr1 205254966 205254976 SREBF1 JASPAR yes 118440124
chr1 205254966 205254976 SREBF2 JASPAR yes 118440125
chr1 205255012 205255033 IRF1 JASPAR yes 34751541
chr1 205255012 205255033 IRF1 JASPAR yes 118440126
chr1 205255014 205255020 TBP TRANSFAC yes 34751542
chr1 205255014 205255020 TBP TRANSFAC yes 118440127
chr1 205255014 205255029 IRF9 JASPAR yes 34751543
chr1 205255014 205255029 IRF9 JASPAR yes 118440128
chr1 205255015 205255029 IRF7 JASPAR yes 34751544
chr1 205255015 205255029 IRF8 JASPAR yes 34751545
chr1 205255015 205255029 IRF7 JASPAR yes 118440129
chr1 205255015 205255029 IRF8 JASPAR yes 118440130
chr1 205255016 205255030 STAT1 JASPAR yes 34751546
chr1 205255016 205255030 STAT1 JASPAR yes 118440131
chr1 205255016 205255031 STAT2 JASPAR yes 34751547
chr1 205255016 205255031 STAT2 JASPAR yes 118440132
chr1 205255016 205255034 IRF2 JASPAR yes 34751548
chr1 205255016 205255034 IRF2 JASPAR yes 118440133
chr1 205255017 205255029 IRF1 JASPAR yes 34751549
chr1 205255017 205255029 IRF1 JASPAR yes 118440134
chr1 205255024 205255044 RREB1 JASPAR yes 34751550
chr1 205255024 205255044 RREB1 JASPAR yes 118440135
chr1 205255028 205255031 MYB TRANSFAC yes 34751551
chr1 205255028 205255031 MYB TRANSFAC yes 118440136
chr1 205255028 205255048 RREB1 JASPAR yes 34751552
chr1 205255028 205255048 RREB1 JASPAR yes 118440137
chr1 205255029 205255049 RREB1 JASPAR yes 34751553
chr1 205255029 205255049 RREB1 JASPAR yes 118440138
chr1 205255031 205255046 RUNX2 JASPAR yes 34751554
chr1 205255031 205255046 RUNX2 JASPAR yes 118440139
chr1 205255032 205255047 MEF2C JASPAR yes 34751555
chr1 205255032 205255047 MEF2C JASPAR yes 118440140
chr1 205255032 205255052 RREB1 JASPAR yes 34751556
chr1 205255032 205255052 RREB1 JASPAR yes 118440141
chr1 205255032 205255053 IRF1 JASPAR yes 34751557
chr1 205255032 205255053 IRF1 JASPAR yes 118440142
chr1 205255033 205255053 RREB1 JASPAR yes 34751558
chr1 205255033 205255053 RREB1 JASPAR yes 118440143
chr1 205255035 205255050 FOXP1 JASPAR yes 34751559
chr1 205255035 205255050 FOXP1 JASPAR yes 118440144
chr1 205255036 205255051 FOXP1 JASPAR yes 34751560
chr1 205255036 205255051 FOXP1 JASPAR yes 118440145
chr1 205255037 205255052 FOXP1 JASPAR yes 34751561
chr1 205255037 205255052 FOXP1 JASPAR yes 118440146
chr1 205255037 205255058 IRF1 JASPAR yes 34751562
chr1 205255037 205255058 IRF1 JASPAR yes 118440147
chr1 205255038 205255053 FOXP1 JASPAR yes 34751563
chr1 205255038 205255053 FOXP1 JASPAR yes 118440148
chr1 205255041 205255056 STAT2 JASPAR yes 34751564
chr1 205255041 205255056 STAT2 JASPAR yes 118440149
chr1 205255048 205255063 RUNX2 JASPAR yes 34751565
chr1 205255048 205255063 RUNX2 JASPAR yes 118440150
chr1 205255049 205255058 RUNX2 JASPAR yes 34751566
chr1 205255049 205255058 RUNX2 JASPAR yes 118440151
chr1 205255049 205255059 RUNX3 JASPAR yes 34751567
chr1 205255049 205255059 RUNX3 JASPAR yes 118440152
chr1 205255049 205255060 RUNX1 JASPAR yes 34751568
chr1 205255049 205255060 RUNX1 JASPAR yes 118440153
chr1 205255096 205255104 NR4A2 JASPAR yes 34751569
chr1 205255096 205255104 NR4A2 JASPAR yes 118440154
chr1 205255098 205255102 ESR1 TRANSFAC yes 34751570
chr1 205255098 205255102 ESR1 TRANSFAC yes 118440155
chr1 205255099 205255109 SREBF2 JASPAR yes 34751571
chr1 205255099 205255109 SREBF2 JASPAR yes 118440156
chr1 205255121 205255132 PROP1 JASPAR yes 34751572
chr1 205255121 205255132 PROP1 JASPAR yes 118440157
chr1 205255156 205255171 ZBTB33 JASPAR yes 34751573
chr1 205255156 205255171 ZBTB33 JASPAR yes 118440158
chr1 205255183 205255187 YY1 TRANSFAC yes 34751574
chr1 205255183 205255187 YY1 TRANSFAC yes 118440159
SNP sites on vista4728[chr1:205254805-205255191]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 205254839 rs558932692 CA C
E2F7 E2F8 FOXP1 IRF1 RREB1
881830
chr1 205254971 rs6703220 C T
MTF1 RUNX3 SREBF1 SREBF2
881831
chr1 205254994 rs192653652 G A,C
RUNX3
881832
chr1 205255137 rs184994738 C T
RUNX3
881833
chr1 205255182 rs149538505 G A
RUNX3
881834
chr1 205255189 rs187585045 T G
RUNX3
881835
Genes possibly regulated by vista4728[chr1:205254805-205255191]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 205111632 205180727 - DSTYK ENSG00000133059.12 205180727 0.65 0.99 1760 25922
chr1 205197304 205242471 + TMCC2 ENSG00000133069.10 205197304 0.81 1.0 1761 42499
chr1 205271187 205290883 - NUAK2 ENSG00000163545.7 205290883 0.81 0.97 1762 64308
chr1 205305220 205326218 - KLHDC8A ENSG00000162873.10 205326218 1.0 0.95 1763 28973
Expression level of Genes
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miRNAs possibly regulated by vista4728[chr1:205254805-205255191]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results