EnhancerDB
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  3. rs558932692[chr1:205254839]
Enhancers that have rs558932692[chr1:205254839]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
chr1 205254805 205255191 vista4728
VISTA
Transcript factors that have rs558932692[chr1:205254839]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205253906 205255293 ZNF143 GTRD no Epithelial (MCF-7) 21371358
chr1 205253906 205255293 ZNF143 GTRD no Epithelial (MCF-7) 107861449
chr1 205253906 205255293 ZNF143 GTRD no Epithelial (MCF-7) 107861450
chr1 205254594 205255043 ZNF143 GTRD no Epithelial (MCF-7) 21371377
chr1 205254594 205255043 ZNF143 GTRD no Epithelial (MCF-7) 107861486
chr1 205254801 205255131 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371378
chr1 205254801 205255131 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861487
chr1 205254829 205254843 E2F7 JASPAR yes 34751521
chr1 205254829 205254843 E2F7 JASPAR yes 118440106
chr1 205254830 205254842 E2F8 JASPAR yes 34751522
chr1 205254830 205254842 E2F8 JASPAR yes 118440107
chr1 205254835 205254855 RREB1 JASPAR yes 34751523
chr1 205254835 205254855 RREB1 JASPAR yes 118440108
chr1 205254837 205254852 FOXP1 JASPAR yes 34751524
chr1 205254837 205254852 FOXP1 JASPAR yes 118440109
chr1 205254838 205254853 FOXP1 JASPAR yes 34751525
chr1 205254838 205254853 FOXP1 JASPAR yes 118440110
chr1 205254839 205254854 FOXP1 JASPAR yes 34751526
chr1 205254839 205254854 FOXP1 JASPAR yes 118440111
chr1 205254839 205254860 IRF1 JASPAR yes 34751527
chr1 205254839 205254860 IRF1 JASPAR yes 118440112
Genes associated with rs558932692[chr1:205254839], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More