EnhancerDB
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  3. rs6703220[chr1:205254971]
Enhancers that have rs6703220[chr1:205254971]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
chr1 205254805 205255191 vista4728
VISTA
Transcript factors that have rs6703220[chr1:205254971]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205253906 205255293 ZNF143 GTRD no Epithelial (MCF-7) 21371358
chr1 205253906 205255293 ZNF143 GTRD no Epithelial (MCF-7) 107861449
chr1 205253906 205255293 ZNF143 GTRD no Epithelial (MCF-7) 107861450
chr1 205254594 205255043 ZNF143 GTRD no Epithelial (MCF-7) 21371377
chr1 205254594 205255043 ZNF143 GTRD no Epithelial (MCF-7) 107861486
chr1 205254801 205255131 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371378
chr1 205254801 205255131 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861487
chr1 205254866 205255286 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371379
chr1 205254866 205255286 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861488
chr1 205254867 205255260 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371380
chr1 205254867 205255260 RUNX3 UCSC Txn Factor no Conserved 107861489
chr1 205254867 205255260 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861490
chr1 205254890 205255210 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371381
chr1 205254890 205255210 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861491
chr1 205254892 205255182 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371382
chr1 205254892 205255182 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861492
chr1 205254908 205255344 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371383
chr1 205254908 205255344 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861493
chr1 205254911 205255347 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371384
chr1 205254911 205255347 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861494
chr1 205254917 205255181 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371385
chr1 205254917 205255181 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861495
chr1 205254922 205255332 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371386
chr1 205254922 205255332 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861496
chr1 205254923 205255253 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371387
chr1 205254923 205255253 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861497
chr1 205254925 205255161 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371388
chr1 205254925 205255161 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861498
chr1 205254925 205255235 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371389
chr1 205254925 205255235 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861499
chr1 205254948 205255328 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371390
chr1 205254948 205255328 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861500
chr1 205254962 205254976 MTF1 JASPAR yes 34751538
chr1 205254962 205254976 MTF1 JASPAR yes 118440123
chr1 205254962 205255222 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371391
chr1 205254962 205255222 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861501
chr1 205254966 205254976 SREBF1 JASPAR yes 34751539
chr1 205254966 205254976 SREBF2 JASPAR yes 34751540
chr1 205254966 205254976 SREBF1 JASPAR yes 118440124
chr1 205254966 205254976 SREBF2 JASPAR yes 118440125
chr1 205254967 205255331 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371392
chr1 205254967 205255331 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861502
chr1 205254970 205255370 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371393
chr1 205254970 205255370 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861503
Genes associated with rs6703220[chr1:205254971], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More