EnhancerDB
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  3. vista4754[chr1:205510005-205510378]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4754[chr1:205510005-205510378]
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Tissue distribution of vista4754
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Transcription factor that possibly regulate vista4754[chr1:205510005-205510378]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 205510026 205510034 BARX1 JASPAR yes 34768928
chr1 205510026 205510034 EN1 JASPAR yes 34768929
chr1 205510026 205510034 ISL2 JASPAR yes 34768930
chr1 205510026 205510034 MSX1 JASPAR yes 34768931
chr1 205510026 205510034 MSX2 JASPAR yes 34768932
chr1 205510026 205510034 PDX1 JASPAR yes 34768933
chr1 205510026 205510034 BARX1 JASPAR yes 118441673
chr1 205510026 205510034 EN1 JASPAR yes 118441674
chr1 205510026 205510034 ISL2 JASPAR yes 118441675
chr1 205510026 205510034 MSX1 JASPAR yes 118441676
chr1 205510026 205510034 MSX2 JASPAR yes 118441677
chr1 205510026 205510034 PDX1 JASPAR yes 118441678
chr1 205510028 205510039 CEBPB JASPAR yes 34768934
chr1 205510028 205510039 CEBPB JASPAR yes 118441679
chr1 205510029 205510040 CEBPA JASPAR yes 34768935
chr1 205510029 205510040 CEBPA JASPAR yes 118441680
chr1 205510045 205510064 RFX2 JASPAR yes 34768936
chr1 205510045 205510064 RFX2 JASPAR yes 118441681
chr1 205510050 205510069 PAX5 JASPAR yes 34768937
chr1 205510050 205510069 PAX5 JASPAR yes 118441682
chr1 205510060 205510064 LFA1 TRANSFAC yes 34768938
chr1 205510060 205510064 LFA1 TRANSFAC yes 118441683
chr1 205510074 205510089 FOXP1 JASPAR yes 34768939
chr1 205510074 205510089 FOXP1 JASPAR yes 118441684
chr1 205510075 205510090 FOXP1 JASPAR yes 34768940
chr1 205510075 205510090 FOXP1 JASPAR yes 118441685
chr1 205510076 205510091 FOXP1 JASPAR yes 34768941
chr1 205510076 205510091 FOXP1 JASPAR yes 118441686
chr1 205510077 205510092 FOXP1 JASPAR yes 34768942
chr1 205510077 205510092 FOXP1 JASPAR yes 118441687
chr1 205510078 205510093 FOXP1 JASPAR yes 34768943
chr1 205510078 205510093 FOXP1 JASPAR yes 118441688
chr1 205510078 205510099 IRF1 JASPAR yes 34768944
chr1 205510078 205510099 IRF1 JASPAR yes 118441689
chr1 205510079 205510094 FOXP1 JASPAR yes 34768945
chr1 205510079 205510094 FOXP1 JASPAR yes 118441690
chr1 205510082 205510097 STAT2 JASPAR yes 34768946
chr1 205510082 205510097 STAT2 JASPAR yes 118441691
chr1 205510105 205510117 GLI2 JASPAR yes 34768947
chr1 205510105 205510117 GLI2 JASPAR yes 118441692
chr1 205510129 205510144 MEF2C JASPAR yes 34768948
chr1 205510129 205510144 MEF2C JASPAR yes 118441693
chr1 205510130 205510145 MEF2A JASPAR yes 34768949
chr1 205510130 205510145 MEF2A JASPAR yes 118441694
chr1 205510133 205510147 ONECUT3 JASPAR yes 34768950
chr1 205510133 205510147 ONECUT3 JASPAR yes 118441695
chr1 205510133 205510148 FOXP1 JASPAR yes 34768951
chr1 205510133 205510148 FOXP1 JASPAR yes 118441696
chr1 205510136 205510148 FOXI1 JASPAR yes 34768952
chr1 205510136 205510148 FOXI1 JASPAR yes 118441697
chr1 205510137 205510152 FOXP1 JASPAR yes 34768953
chr1 205510137 205510152 FOXP1 JASPAR yes 118441698
chr1 205510138 205510149 FOXA1 JASPAR yes 34768954
chr1 205510138 205510149 FOXA1 JASPAR yes 118441699
chr1 205510138 205510153 FOXA1 JASPAR yes 34768955
chr1 205510138 205510153 FOXA1 JASPAR yes 118441700
chr1 205510138 205510154 SOX8 JASPAR yes 34768956
chr1 205510138 205510154 SOX8 JASPAR yes 118441701
chr1 205510139 205510150 FOXC1 JASPAR yes 34768957
chr1 205510139 205510150 FOXC1 JASPAR yes 118441702
chr1 205510139 205510151 FOXC2 JASPAR yes 34768958
chr1 205510139 205510151 FOXC2 JASPAR yes 118441703
chr1 205510140 205510151 FOXP2 JASPAR yes 34768959
chr1 205510140 205510151 FOXP2 JASPAR yes 118441704
chr1 205510154 205510158 NFE TRANSFAC yes 34768960
chr1 205510154 205510158 NFE TRANSFAC yes 118441705
chr1 205510155 205510160 GATA2 JASPAR yes 34768961
chr1 205510155 205510160 GATA2 JASPAR yes 118441706
chr1 205510162 205510167 ETS2 TRANSFAC yes 34768962
chr1 205510162 205510167 ETS2 TRANSFAC yes 118441707
chr1 205510203 205510209 HiNF-A TRANSFAC yes 34768963
chr1 205510203 205510209 HiNF-A TRANSFAC yes 118441708
chr1 205510205 205510216 RUNX1 JASPAR yes 34768964
chr1 205510205 205510216 RUNX1 JASPAR yes 118441709
chr1 205510214 205510224 GSC JASPAR yes 34768965
chr1 205510214 205510224 GSC JASPAR yes 118441710
chr1 205510214 205510227 NFKB2 JASPAR yes 34768966
chr1 205510214 205510227 NFKB2 JASPAR yes 118441711
chr1 205510215 205510223 RHOXF1 JASPAR yes 34768967
chr1 205510215 205510223 RHOXF1 JASPAR yes 118441712
chr1 205510215 205510224 PITX3 JASPAR yes 34768968
chr1 205510215 205510224 PITX3 JASPAR yes 118441713
chr1 205510220 205510225 GATA2 JASPAR yes 34768969
chr1 205510220 205510225 GATA2 JASPAR yes 118441714
chr1 205510229 205510240 FOXA1 JASPAR yes 34768970
chr1 205510229 205510240 FOXA1 JASPAR yes 118441715
chr1 205510231 205510242 FOXP2 JASPAR yes 34768971
chr1 205510231 205510242 FOXP2 JASPAR yes 118441716
chr1 205510232 205510240 FOXO3 JASPAR yes 34768972
chr1 205510232 205510240 FOXO3 JASPAR yes 118441717
chr1 205510233 205510240 FOXD2 JASPAR yes 34768973
chr1 205510233 205510240 FOXI1 JASPAR yes 34768974
chr1 205510233 205510240 FOXL1 JASPAR yes 34768975
chr1 205510233 205510240 FOXO4 JASPAR yes 34768976
chr1 205510233 205510240 FOXO6 JASPAR yes 34768977
chr1 205510233 205510240 FOXP3 JASPAR yes 34768978
chr1 205510233 205510240 FOXD2 JASPAR yes 118441718
chr1 205510233 205510240 FOXI1 JASPAR yes 118441719
chr1 205510233 205510240 FOXL1 JASPAR yes 118441720
chr1 205510233 205510240 FOXO4 JASPAR yes 118441721
chr1 205510233 205510240 FOXO6 JASPAR yes 118441722
chr1 205510233 205510240 FOXP3 JASPAR yes 118441723
chr1 205510233 205510241 FOXD1 JASPAR yes 34768979
chr1 205510233 205510241 FOXO3 JASPAR yes 34768980
chr1 205510233 205510241 FOXD1 JASPAR yes 118441724
chr1 205510233 205510241 FOXO3 JASPAR yes 118441725
chr1 205510235 205510247 NHLH1 JASPAR yes 34768981
chr1 205510235 205510247 NHLH1 JASPAR yes 118441726
chr1 205510235 205510248 ZBTB18 JASPAR yes 34768982
chr1 205510235 205510248 ZBTB18 JASPAR yes 118441727
chr1 205510236 205510246 MSC JASPAR yes 34768983
chr1 205510236 205510246 MYF6 JASPAR yes 34768984
chr1 205510236 205510246 NHLH1 JASPAR yes 34768985
chr1 205510236 205510246 TFAP4 JASPAR yes 34768986
chr1 205510236 205510246 MSC JASPAR yes 118441728
chr1 205510236 205510246 MYF6 JASPAR yes 118441729
chr1 205510236 205510246 NHLH1 JASPAR yes 118441730
chr1 205510236 205510246 TFAP4 JASPAR yes 118441731
chr1 205510241 205510250 THAP1 JASPAR yes 34768987
chr1 205510241 205510250 THAP1 JASPAR yes 118441732
chr1 205510257 205510278 ZNF263 JASPAR yes 34768988
chr1 205510257 205510278 ZNF263 JASPAR yes 118441733
chr1 205510260 205510281 ZNF263 JASPAR yes 34768989
chr1 205510260 205510281 ZNF263 JASPAR yes 118441734
chr1 205510262 205510283 ZNF263 JASPAR yes 34768990
chr1 205510262 205510283 ZNF263 JASPAR yes 118441735
chr1 205510265 205510276 E2F6 JASPAR yes 34768991
chr1 205510265 205510276 E2F6 JASPAR yes 118441736
chr1 205510267 205510288 ZNF263 JASPAR yes 34768992
chr1 205510267 205510288 ZNF263 JASPAR yes 118441737
chr1 205510268 205510289 ZNF263 JASPAR yes 34768993
chr1 205510268 205510289 ZNF263 JASPAR yes 118441738
chr1 205510274 205510295 ZNF263 JASPAR yes 34768994
chr1 205510274 205510295 ZNF263 JASPAR yes 118441739
chr1 205510278 205510288 SP1 JASPAR yes 34768995
chr1 205510278 205510288 SP1 JASPAR yes 118441740
chr1 205510280 205510288 EHF JASPAR yes 34768996
chr1 205510280 205510288 EHF JASPAR yes 118441741
chr1 205510318 205510329 HOXC13 JASPAR yes 34768997
chr1 205510318 205510329 HOXC13 JASPAR yes 118441742
chr1 205510361 205510374 POU2F2 JASPAR yes 34768998
chr1 205510361 205510374 POU2F2 JASPAR yes 118441743
chr1 205510362 205510373 FOXB1 JASPAR yes 34768999
chr1 205510362 205510373 FOXC1 JASPAR yes 34769000
chr1 205510362 205510373 FOXB1 JASPAR yes 118441744
chr1 205510362 205510373 FOXC1 JASPAR yes 118441745
chr1 205510368 205510379 BATF JASPAR yes 34769001
chr1 205510368 205510379 BATF JASPAR yes 118441746
chr1 205510377 205510392 FOXA1 JASPAR yes 34769002
chr1 205510377 205510392 FOXA1 JASPAR yes 118441747
SNP sites on vista4754[chr1:205510005-205510378]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 205510018 rs79340696 C T no 884423
chr1 205510077 rs373505405 C CAAAAA,CAAAAAA,CAAAAAAA
FOXP1
884424
chr1 205510077 rs60705574 C CAA,CAAAAAAA,CAAAAAAAA
FOXP1
884425
chr1 205510136 rs148637857 G T
FOXI1 FOXP1 MEF2A MEF2C ONECUT3
884426
chr1 205510217 rs538727972 G A
GSC NFKB2 PITX3 RHOXF1
884427
chr1 205510242 rs12751472 C T
FOXP2 MSC MYF6 NHLH1 TFAP4 THAP1 ZBTB18
884428
chr1 205510279 rs540448828 C T
SP1 ZNF263
884429
chr1 205510376 rs12041365 G A
BATF
884430
Genes possibly regulated by vista4754[chr1:205510005-205510378]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 205350506 205425082 - LEMD1 ENSG00000186007.5 205425082 0.86 1.0 1764 15077
chr1 205473723 205501921 + CDK18 ENSG00000117266.11 205473723 0.8 1.0 1765 63718
chr1 205538013 205572046 + MFSD4 ENSG00000174514.8 205538013 0.97 0.99 1766 72365
chr1 205577071 205601090 - ELK4 ENSG00000158711.9 205601090 0.87 0.99 1767 9288
Expression level of Genes
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miRNAs possibly regulated by vista4754[chr1:205510005-205510378]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results