EnhancerDB
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  3. vista4900[chr1:209589374-209589797]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4900[chr1:209589374-209589797]
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Tissue distribution of vista4900
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Transcription factor that possibly regulate vista4900[chr1:209589374-209589797]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 209589466 209589757 FOS UCSC Txn Factor no Conserved 107865767
chr1 209589362 209589375 NFKB1 JASPAR yes 34973767
chr1 209589362 209589375 NFKB1 JASPAR yes 118448254
chr1 209589414 209589420 YY1 JASPAR yes 34973769
chr1 209589414 209589420 YY1 JASPAR yes 118448255
chr1 209589418 209589424 MZF1 JASPAR yes 34973770
chr1 209589418 209589424 MZF1 JASPAR yes 118448256
chr1 209589419 209589428 ZEB1 JASPAR yes 34973771
chr1 209589419 209589428 ZEB1 JASPAR yes 118448257
chr1 209589422 209589427 USF2 TRANSFAC yes 34973772
chr1 209589422 209589427 USF2 TRANSFAC yes 118448258
chr1 209589428 209589446 ESR1 JASPAR yes 34973773
chr1 209589428 209589446 ESR1 JASPAR yes 118448259
chr1 209589433 209589442 THAP1 JASPAR yes 34973774
chr1 209589433 209589442 THAP1 JASPAR yes 118448260
chr1 209589435 209589456 ZNF263 JASPAR yes 34973775
chr1 209589435 209589456 ZNF263 JASPAR yes 118448261
chr1 209589436 209589440 LFA1 TRANSFAC yes 34973776
chr1 209589436 209589440 LFA1 TRANSFAC yes 118448262
chr1 209589448 209589455 CEBPA TRANSFAC yes 34973777
chr1 209589448 209589455 CEBPA TRANSFAC yes 118448263
chr1 209589449 209589460 E2F6 JASPAR yes 34973778
chr1 209589449 209589460 E2F6 JASPAR yes 118448264
chr1 209589459 209589478 PAX5 JASPAR yes 34973779
chr1 209589459 209589478 PAX5 JASPAR yes 118448265
chr1 209589486 209589496 HEY2 JASPAR yes 34973780
chr1 209589486 209589496 HEY2 JASPAR yes 118448266
chr1 209589492 209589507 TFAP2A JASPAR yes 34973781
chr1 209589492 209589507 TFAP2C JASPAR yes 34973782
chr1 209589492 209589507 TFAP2A JASPAR yes 118448267
chr1 209589492 209589507 TFAP2C JASPAR yes 118448268
chr1 209589500 209589521 REST JASPAR yes 34973783
chr1 209589500 209589521 REST JASPAR yes 118448269
chr1 209589501 209589520 REST JASPAR yes 34973784
chr1 209589501 209589520 REST JASPAR yes 118448270
chr1 209589509 209589514 SP1 TRANSFAC yes 34973785
chr1 209589509 209589514 SP1 TRANSFAC yes 118448271
chr1 209589510 209589523 ZBTB18 JASPAR yes 34973786
chr1 209589510 209589523 ZBTB18 JASPAR yes 118448272
chr1 209589512 209589522 MSC JASPAR yes 34973787
chr1 209589512 209589522 MSC JASPAR yes 118448273
chr1 209589513 209589526 SCRT2 JASPAR yes 34973788
chr1 209589513 209589526 SCRT2 JASPAR yes 118448274
chr1 209589537 209589541 LFA1 TRANSFAC yes 34973789
chr1 209589537 209589541 LFA1 TRANSFAC yes 118448275
chr1 209589537 209589557 TP63 JASPAR yes 34973790
chr1 209589537 209589557 TP63 JASPAR yes 118448276
chr1 209589538 209589547 SNAI2 JASPAR yes 34973791
chr1 209589538 209589547 SNAI2 JASPAR yes 118448277
chr1 209589538 209589548 ID4 JASPAR yes 34973792
chr1 209589538 209589548 NHLH1 JASPAR yes 34973793
chr1 209589538 209589548 TCF3 JASPAR yes 34973794
chr1 209589538 209589548 TCF4 JASPAR yes 34973795
chr1 209589538 209589548 ID4 JASPAR yes 118448278
chr1 209589538 209589548 NHLH1 JASPAR yes 118448279
chr1 209589538 209589548 TCF3 JASPAR yes 118448280
chr1 209589538 209589548 TCF4 JASPAR yes 118448281
chr1 209589538 209589556 TP73 JASPAR yes 34973796
chr1 209589538 209589556 TP73 JASPAR yes 118448282
chr1 209589540 209589549 ZEB1 JASPAR yes 34973797
chr1 209589540 209589549 ZEB1 JASPAR yes 118448283
chr1 209589540 209589555 TP53 JASPAR yes 34973798
chr1 209589540 209589555 TP53 JASPAR yes 118448284
chr1 209589541 209589549 TBX5 JASPAR yes 34973799
chr1 209589541 209589549 TBX5 JASPAR yes 118448285
chr1 209589567 209589572 ETS2 TRANSFAC yes 34973800
chr1 209589567 209589572 ETS2 TRANSFAC yes 118448286
chr1 209589573 209589584 EBF1 JASPAR yes 34973801
chr1 209589573 209589584 EBF1 JASPAR yes 118448287
chr1 209589584 209589589 SP1 TRANSFAC yes 34973802
chr1 209589584 209589589 SP1 TRANSFAC yes 118448288
chr1 209589589 209589593 H1TF2 TRANSFAC yes 34973803
chr1 209589589 209589593 NFE TRANSFAC yes 34973804
chr1 209589589 209589593 SRF TRANSFAC yes 34973805
chr1 209589589 209589593 H1TF2 TRANSFAC yes 118448289
chr1 209589589 209589593 NFE TRANSFAC yes 118448290
chr1 209589589 209589593 SRF TRANSFAC yes 118448291
chr1 209589592 209589603 FOS JASPAR yes 34973806
chr1 209589592 209589603 FOSL1 JASPAR yes 34973807
chr1 209589592 209589603 NFE2 JASPAR yes 34973808
chr1 209589592 209589603 FOS JASPAR yes 118448292
chr1 209589592 209589603 FOSL1 JASPAR yes 118448293
chr1 209589592 209589603 NFE2 JASPAR yes 118448294
chr1 209589593 209589602 JDP2 JASPAR yes 34973809
chr1 209589593 209589602 JDP2 JASPAR yes 118448295
chr1 209589593 209589604 JUNB JASPAR yes 34973810
chr1 209589593 209589604 JUNB JASPAR yes 118448296
chr1 209589594 209589605 BATF JASPAR yes 34973811
chr1 209589594 209589605 BATF JASPAR yes 118448297
chr1 209589635 209589649 MTF1 JASPAR yes 34973812
chr1 209589635 209589649 MTF1 JASPAR yes 118448298
chr1 209589653 209589657 LFA1 TRANSFAC yes 34973813
chr1 209589653 209589657 LFA1 TRANSFAC yes 118448299
chr1 209589654 209589664 NHLH1 JASPAR yes 34973814
chr1 209589654 209589664 NHLH1 JASPAR yes 118448300
chr1 209589704 209589725 ZNF263 JASPAR yes 34973815
chr1 209589704 209589725 ZNF263 JASPAR yes 118448301
chr1 209589716 209589726 ETV6 JASPAR yes 34973816
chr1 209589716 209589726 ETV6 JASPAR yes 118448302
chr1 209589718 209589723 ETS2 TRANSFAC yes 34973817
chr1 209589718 209589723 ETS2 TRANSFAC yes 118448303
chr1 209589729 209589739 SP1 JASPAR yes 34973818
chr1 209589729 209589739 SP1 JASPAR yes 118448304
chr1 209589736 209589749 NFKB2 JASPAR yes 34973819
chr1 209589736 209589749 NFKB2 JASPAR yes 118448305
chr1 209589737 209589748 NFKB1 JASPAR yes 34973820
chr1 209589737 209589748 NFKB1 JASPAR yes 118448306
chr1 209589738 209589748 NFKB1 JASPAR yes 34973821
chr1 209589738 209589748 RELA JASPAR yes 34973822
chr1 209589738 209589748 REL JASPAR yes 34973823
chr1 209589738 209589748 NFKB1 JASPAR yes 118448307
chr1 209589738 209589748 RELA JASPAR yes 118448308
chr1 209589738 209589748 REL JASPAR yes 118448309
chr1 209589738 209589749 NFKB1 JASPAR yes 34973824
chr1 209589738 209589749 NFKB1 JASPAR yes 118448310
chr1 209589739 209589749 REL JASPAR yes 34973825
chr1 209589739 209589749 REL JASPAR yes 118448311
chr1 209589756 209589761 GATA2 JASPAR yes 34973826
chr1 209589756 209589761 GATA2 JASPAR yes 118448312
chr1 209589767 209589773 SOX10 JASPAR yes 34973827
chr1 209589767 209589773 SOX10 JASPAR yes 118448313
chr1 209589773 209589788 RFX5 JASPAR yes 34973828
chr1 209589773 209589788 RFX5 JASPAR yes 118448314
chr1 209589782 209589788 TCF4 TRANSFAC yes 34973829
chr1 209589782 209589788 TCF4 TRANSFAC yes 118448315
SNP sites on vista4900[chr1:209589374-209589797]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 209589544 rs377098640 G A
FOS ID4 NHLH1 SNAI2 TBX5 TCF3 TCF4 TP53 TP63 TP73 ZEB1
906043
chr1 209589686 rs7531215 A G
FOS
906044
chr1 209589730 rs143719841 G A
FOS SP1
906045
Genes possibly regulated by vista4900[chr1:209589374-209589797]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista4900[chr1:209589374-209589797]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 209605548 209605568 + hsa-miR-205-3p MIMAT0009197 209602164 0.0001192321449862883 0.947205 0.692021 121
Expression level of miRNAs
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