EnhancerDB
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  3. rs143719841[chr1:209589730]
Enhancers that have rs143719841[chr1:209589730]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 209589374 209589797 vista4900
VISTA
Transcript factors that have rs143719841[chr1:209589730]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209589369 209589943 ZBTB33 GTRD no Brain (SK-N-SH) 107865765
chr1 209589423 209589756 ZNF274 GTRD no Cervix (HeLa-S3) 21375372
chr1 209589423 209589756 ZNF274 GTRD no Cervix (HeLa-S3) 107865766
chr1 209589466 209589757 FOS UCSC Txn Factor no Conserved 107865767
chr1 209589729 209589739 SP1 JASPAR yes 34973818
chr1 209589729 209589739 SP1 JASPAR yes 118448304
Genes associated with rs143719841[chr1:209589730], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More