EnhancerDB
  1. Home
  2. Enhancers
  3. vista50163[chr5:172193800-172194232]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50163[chr5:172193800-172194232]
Back to top
Tissue distribution of vista50163
Back to top
Transcription factor that possibly regulate vista50163[chr5:172193800-172194232]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 107693851
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537470
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537471
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537472
chr5 172193792 172193810 RARA JASPAR yes 67824357
chr5 172193792 172193810 RARA JASPAR yes 70762618
chr5 172193802 172193807 GATA2 JASPAR yes 67824358
chr5 172193802 172193807 GATA2 JASPAR yes 70762619
chr5 172193805 172193809 YY1 TRANSFAC yes 67824359
chr5 172193805 172193809 YY1 TRANSFAC yes 70762620
chr5 172193805 172193816 ETV2 JASPAR yes 67824360
chr5 172193805 172193816 ETV2 JASPAR yes 70762621
chr5 172193806 172193814 FEV JASPAR yes 67824361
chr5 172193806 172193814 FEV JASPAR yes 70762622
chr5 172193808 172193813 ETS2 TRANSFAC yes 67824362
chr5 172193808 172193813 ETS2 TRANSFAC yes 70762623
chr5 172193817 172193834 ZNF410 JASPAR yes 67824363
chr5 172193817 172193834 ZNF410 JASPAR yes 70762624
chr5 172193831 172193837 SOX10 JASPAR yes 67824364
chr5 172193831 172193837 SOX10 JASPAR yes 70762625
chr5 172193843 172193849 SOX10 JASPAR yes 67824365
chr5 172193843 172193849 SOX10 JASPAR yes 70762626
chr5 172193854 172193859 SP1 TRANSFAC yes 67824366
chr5 172193854 172193859 SP1 TRANSFAC yes 70762627
chr5 172193857 172193871 PLAG1 JASPAR yes 67824367
chr5 172193857 172193871 PLAG1 JASPAR yes 70762628
chr5 172193867 172193872 SP1 TRANSFAC yes 67824368
chr5 172193867 172193872 SP1 TRANSFAC yes 70762629
chr5 172193899 172193902 MYB TRANSFAC yes 67824369
chr5 172193899 172193902 MYB TRANSFAC yes 70762630
chr5 172193907 172193911 YY1 TRANSFAC yes 67824370
chr5 172193907 172193911 YY1 TRANSFAC yes 70762631
chr5 172193916 172193933 ZNF410 JASPAR yes 67824371
chr5 172193916 172193933 ZNF410 JASPAR yes 70762632
chr5 172193917 172193925 RHOXF1 JASPAR yes 67824372
chr5 172193917 172193925 RHOXF1 JASPAR yes 70762633
chr5 172193926 172193931 NFY TRANSFAC yes 67824373
chr5 172193926 172193931 NFY TRANSFAC yes 70762634
chr5 172193934 172193942 DLX6 JASPAR yes 67824374
chr5 172193934 172193942 MSX1 JASPAR yes 67824375
chr5 172193934 172193942 DLX6 JASPAR yes 70762635
chr5 172193934 172193942 MSX1 JASPAR yes 70762636
chr5 172193944 172193958 SPI1 JASPAR yes 67824376
chr5 172193944 172193958 SPI1 JASPAR yes 70762637
chr5 172193947 172193962 FOXP1 JASPAR yes 67824377
chr5 172193947 172193962 FOXP1 JASPAR yes 70762638
chr5 172193964 172193970 NFIC JASPAR yes 67824378
chr5 172193964 172193970 NFIC JASPAR yes 70762639
chr5 172193992 172193997 GATA2 JASPAR yes 67824379
chr5 172193992 172193997 GATA2 JASPAR yes 70762640
chr5 172194010 172194020 HOXB13 JASPAR yes 67824380
chr5 172194010 172194020 HOXD13 JASPAR yes 67824381
chr5 172194010 172194020 HOXB13 JASPAR yes 70762641
chr5 172194010 172194020 HOXD13 JASPAR yes 70762642
chr5 172194010 172194021 HOXA10 JASPAR yes 67824382
chr5 172194010 172194021 HOXA10 JASPAR yes 70762643
chr5 172194011 172194021 GBX2 JASPAR yes 67824383
chr5 172194011 172194021 GSX2 JASPAR yes 67824384
chr5 172194011 172194021 HOXB3 JASPAR yes 67824385
chr5 172194011 172194021 MNX1 JASPAR yes 67824386
chr5 172194011 172194021 RAX JASPAR yes 67824387
chr5 172194011 172194021 GBX2 JASPAR yes 70762644
chr5 172194011 172194021 GSX2 JASPAR yes 70762645
chr5 172194011 172194021 HOXB3 JASPAR yes 70762646
chr5 172194011 172194021 MNX1 JASPAR yes 70762647
chr5 172194011 172194021 RAX JASPAR yes 70762648
chr5 172194012 172194020 BARX1 JASPAR yes 67824388
chr5 172194012 172194020 BSX JASPAR yes 67824389
chr5 172194012 172194020 ISL2 JASPAR yes 67824390
chr5 172194012 172194020 LMX1B JASPAR yes 67824391
chr5 172194012 172194020 MSX1 JASPAR yes 67824392
chr5 172194012 172194020 MSX2 JASPAR yes 67824393
chr5 172194012 172194020 BARX1 JASPAR yes 70762649
chr5 172194012 172194020 BSX JASPAR yes 70762650
chr5 172194012 172194020 ISL2 JASPAR yes 70762651
chr5 172194012 172194020 LMX1B JASPAR yes 70762652
chr5 172194012 172194020 MSX1 JASPAR yes 70762653
chr5 172194012 172194020 MSX2 JASPAR yes 70762654
chr5 172194012 172194021 VENTX JASPAR yes 67824394
chr5 172194012 172194021 VENTX JASPAR yes 70762655
chr5 172194014 172194028 GATA2 JASPAR yes 67824395
chr5 172194014 172194028 GATA2 JASPAR yes 70762656
chr5 172194018 172194026 GATA3 JASPAR yes 67824396
chr5 172194018 172194026 GATA3 JASPAR yes 70762657
chr5 172194098 172194104 HiNF-A TRANSFAC yes 67824397
chr5 172194098 172194104 HiNF-A TRANSFAC yes 70762658
chr5 172194137 172194141 ESR1 TRANSFAC yes 67824398
chr5 172194137 172194141 ESR1 TRANSFAC yes 70762659
chr5 172194145 172194150 TFAP2A TRANSFAC yes 67824399
chr5 172194145 172194150 TFAP2A TRANSFAC yes 70762660
chr5 172194145 172194151 MZF1 JASPAR yes 67824400
chr5 172194145 172194151 MZF1 JASPAR yes 70762661
chr5 172194146 172194166 RREB1 JASPAR yes 67824401
chr5 172194146 172194166 RREB1 JASPAR yes 70762662
chr5 172194155 172194175 RREB1 JASPAR yes 67824402
chr5 172194155 172194175 RREB1 JASPAR yes 70762663
chr5 172194166 172194171 H4TF1 TRANSFAC yes 67824403
chr5 172194166 172194171 H4TF1 TRANSFAC yes 70762664
chr5 172194167 172194182 FOXP1 JASPAR yes 67824404
chr5 172194167 172194182 FOXP1 JASPAR yes 70762665
chr5 172194177 172194192 FOXA1 JASPAR yes 67824405
chr5 172194177 172194192 FOXA1 JASPAR yes 70762666
chr5 172194181 172194185 YY1 TRANSFAC yes 67824406
chr5 172194181 172194185 YY1 TRANSFAC yes 70762667
chr5 172194181 172194192 FOXA1 JASPAR yes 67824407
chr5 172194181 172194192 FOXA1 JASPAR yes 70762668
chr5 172194199 172194220 IRF1 JASPAR yes 67824408
chr5 172194199 172194220 IRF1 JASPAR yes 70762669
chr5 172194201 172194216 FOXP1 JASPAR yes 67824409
chr5 172194201 172194216 FOXP1 JASPAR yes 70762670
chr5 172194201 172194222 IRF1 JASPAR yes 67824410
chr5 172194201 172194222 IRF1 JASPAR yes 70762671
chr5 172194203 172194224 IRF1 JASPAR yes 67824411
chr5 172194203 172194224 IRF1 JASPAR yes 70762672
chr5 172194205 172194226 IRF1 JASPAR yes 67824412
chr5 172194205 172194226 IRF1 JASPAR yes 70762673
chr5 172194207 172194222 PRDM1 JASPAR yes 67824413
chr5 172194207 172194222 STAT2 JASPAR yes 67824414
chr5 172194207 172194222 PRDM1 JASPAR yes 70762674
chr5 172194207 172194222 STAT2 JASPAR yes 70762675
chr5 172194208 172194222 SPIC JASPAR yes 67824415
chr5 172194208 172194222 STAT1 JASPAR yes 67824416
chr5 172194208 172194222 SPIC JASPAR yes 70762676
chr5 172194208 172194222 STAT1 JASPAR yes 70762677
chr5 172194209 172194230 IRF1 JASPAR yes 67824417
chr5 172194209 172194230 IRF1 JASPAR yes 70762678
chr5 172194210 172194225 FOXP1 JASPAR yes 67824418
chr5 172194210 172194225 FOXP1 JASPAR yes 70762679
chr5 172194210 172194231 IRF1 JASPAR yes 67824419
chr5 172194210 172194231 IRF1 JASPAR yes 70762680
chr5 172194212 172194227 FOXP1 JASPAR yes 67824420
chr5 172194212 172194227 FOXP1 JASPAR yes 70762681
chr5 172194214 172194229 FOXP1 JASPAR yes 67824421
chr5 172194214 172194229 FOXP1 JASPAR yes 70762682
chr5 172194215 172194230 FOXP1 JASPAR yes 67824422
chr5 172194215 172194230 FOXP1 JASPAR yes 70762683
chr5 172194216 172194231 FOXP1 JASPAR yes 67824423
chr5 172194216 172194231 FOXP1 JASPAR yes 70762684
chr5 172194217 172194232 FOXP1 JASPAR yes 67824424
chr5 172194217 172194232 FOXP1 JASPAR yes 70762685
chr5 172194229 172194235 NFIC JASPAR yes 67824425
chr5 172194229 172194235 NFIC JASPAR yes 70762686
chr5 172194231 172194235 H1TF2 TRANSFAC yes 67824426
chr5 172194231 172194235 NFE TRANSFAC yes 67824427
chr5 172194231 172194235 SRF TRANSFAC yes 67824428
chr5 172194231 172194235 H1TF2 TRANSFAC yes 70762687
chr5 172194231 172194235 NFE TRANSFAC yes 70762688
chr5 172194231 172194235 SRF TRANSFAC yes 70762689
SNP sites on vista50163[chr5:172193800-172194232]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 172193872 rs35094540 C A,T
POLR2A SP1
8704543
chr5 172193874 rs178723 A G
POLR2A
8704544
chr5 172193908 rs10066830 C T
POLR2A YY1
8704545
chr5 172193973 rs34617200 G C,T
POLR2A
8704546
chr5 172194066 rs10067027 G A
POLR2A
8704547
chr5 172194116 rs72809987 T C
POLR2A
8704548
chr5 172194161 rs77087135 G C
POLR2A RREB1
8704549
chr5 172194192 rs34712915 TAGTGCTTGGATTTTTTTTC T
FOXA1 POLR2A
8704550
chr5 172194203 rs573244712 T A
FOXP1 IRF1 POLR2A
8704551
chr5 172194219 rs535966391 T C
FOXP1 IRF1 POLR2A PRDM1 SPIC STAT1 STAT2
8704552
chr5 172194224 rs322352 T C
FOXP1 IRF1 POLR2A
8704553
Genes possibly regulated by vista50163[chr5:172193800-172194232]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 172195093 172198198 - DUSP1 ENSG00000120129.5 172198198 0.79 1.0 5985 96034
chr5 172261278 172379688 + ERGIC1 ENSG00000113719.11 172261278 0.61 1.0 5986 32954
Expression level of Genes
Back to top
miRNAs possibly regulated by vista50163[chr5:172193800-172194232]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results