EnhancerDB
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  3. rs322352[chr5:172194224]
Enhancers that have rs322352[chr5:172194224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172182745 172195855 enh8880
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Stomach
chr5 172193800 172194232 vista50163
VISTA
Transcript factors that have rs322352[chr5:172194224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 107693851
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537470
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537471
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537472
chr5 172194203 172194224 IRF1 JASPAR yes 67824411
chr5 172194203 172194224 IRF1 JASPAR yes 70762672
chr5 172194205 172194226 IRF1 JASPAR yes 67824412
chr5 172194205 172194226 IRF1 JASPAR yes 70762673
chr5 172194209 172194230 IRF1 JASPAR yes 67824417
chr5 172194209 172194230 IRF1 JASPAR yes 70762678
chr5 172194210 172194225 FOXP1 JASPAR yes 67824418
chr5 172194210 172194225 FOXP1 JASPAR yes 70762679
chr5 172194210 172194231 IRF1 JASPAR yes 67824419
chr5 172194210 172194231 IRF1 JASPAR yes 70762680
chr5 172194212 172194227 FOXP1 JASPAR yes 67824420
chr5 172194212 172194227 FOXP1 JASPAR yes 70762681
chr5 172194214 172194229 FOXP1 JASPAR yes 67824421
chr5 172194214 172194229 FOXP1 JASPAR yes 70762682
chr5 172194215 172194230 FOXP1 JASPAR yes 67824422
chr5 172194215 172194230 FOXP1 JASPAR yes 70762683
chr5 172194216 172194231 FOXP1 JASPAR yes 67824423
chr5 172194216 172194231 FOXP1 JASPAR yes 70762684
chr5 172194217 172194232 FOXP1 JASPAR yes 67824424
chr5 172194217 172194232 FOXP1 JASPAR yes 70762685
Genes associated with rs322352[chr5:172194224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More