EnhancerDB
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Enhancers that have rs573244712[chr5:172194203]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172182745 172195855 enh8880
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Stomach
chr5 172193800 172194232 vista50163
VISTA
Transcript factors that have rs573244712[chr5:172194203]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 107693851
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537470
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537471
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537472
chr5 172194199 172194220 IRF1 JASPAR yes 67824408
chr5 172194199 172194220 IRF1 JASPAR yes 70762669
chr5 172194201 172194216 FOXP1 JASPAR yes 67824409
chr5 172194201 172194216 FOXP1 JASPAR yes 70762670
chr5 172194201 172194222 IRF1 JASPAR yes 67824410
chr5 172194201 172194222 IRF1 JASPAR yes 70762671
chr5 172194203 172194224 IRF1 JASPAR yes 67824411
chr5 172194203 172194224 IRF1 JASPAR yes 70762672
Genes associated with rs573244712[chr5:172194203], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More