EnhancerDB
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  3. vista50190[chr5:172308731-172309533]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50190[chr5:172308731-172309533]
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Tissue distribution of vista50190
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Transcription factor that possibly regulate vista50190[chr5:172308731-172309533]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 172308874 172309119 ELF1 UCSC Txn Factor no Conserved 108537526
chr5 172308913 172309271 RUNX3 UCSC Txn Factor no Conserved 108537527
chr5 172308723 172308731 TBX5 JASPAR yes 67838839
chr5 172308723 172308731 TBX5 JASPAR yes 70764387
chr5 172308781 172308790 PITX3 JASPAR yes 67838840
chr5 172308781 172308790 PITX3 JASPAR yes 70764388
chr5 172308781 172308791 GSC JASPAR yes 67838841
chr5 172308781 172308791 GSC JASPAR yes 70764389
chr5 172308782 172308790 RHOXF1 JASPAR yes 67838842
chr5 172308782 172308790 RHOXF1 JASPAR yes 70764390
chr5 172308788 172308798 NOTO JASPAR yes 67838843
chr5 172308788 172308798 NOTO JASPAR yes 70764391
chr5 172308808 172308824 T JASPAR yes 67838844
chr5 172308808 172308824 T JASPAR yes 70764392
chr5 172308810 172308818 BARX1 JASPAR yes 67838845
chr5 172308810 172308818 BARX1 JASPAR yes 70764393
chr5 172308825 172308836 GCM1 JASPAR yes 67838846
chr5 172308825 172308836 GCM1 JASPAR yes 70764394
chr5 172308837 172308852 ESR2 JASPAR yes 67838847
chr5 172308837 172308852 ESR2 JASPAR yes 70764395
chr5 172308877 172308898 ZNF263 JASPAR yes 67838848
chr5 172308877 172308898 ZNF263 JASPAR yes 70764396
chr5 172308879 172308894 PRDM1 JASPAR yes 67838849
chr5 172308879 172308894 PRDM1 JASPAR yes 70764397
chr5 172308881 172308902 ZNF263 JASPAR yes 67838850
chr5 172308881 172308902 ZNF263 JASPAR yes 70764398
chr5 172308882 172308893 E2F6 JASPAR yes 67838851
chr5 172308882 172308893 E2F6 JASPAR yes 70764399
chr5 172308884 172308905 ZNF263 JASPAR yes 67838852
chr5 172308884 172308905 ZNF263 JASPAR yes 70764400
chr5 172308886 172308907 ZNF263 JASPAR yes 67838853
chr5 172308886 172308907 ZNF263 JASPAR yes 70764401
chr5 172308887 172308908 ZNF263 JASPAR yes 67838854
chr5 172308887 172308908 ZNF263 JASPAR yes 70764402
chr5 172308889 172308910 ZNF263 JASPAR yes 67838855
chr5 172308889 172308910 ZNF263 JASPAR yes 70764403
chr5 172308895 172308916 ZNF263 JASPAR yes 67838856
chr5 172308895 172308916 ZNF263 JASPAR yes 70764404
chr5 172308898 172308919 ZNF263 JASPAR yes 67838857
chr5 172308898 172308919 ZNF263 JASPAR yes 70764405
chr5 172308901 172308922 ZNF263 JASPAR yes 67838858
chr5 172308901 172308922 ZNF263 JASPAR yes 70764406
chr5 172308904 172308925 ZNF263 JASPAR yes 67838859
chr5 172308904 172308925 ZNF263 JASPAR yes 70764407
chr5 172308932 172308952 TP63 JASPAR yes 67838860
chr5 172308932 172308952 TP63 JASPAR yes 70764408
chr5 172308937 172308941 ESR1 TRANSFAC yes 67838861
chr5 172308937 172308941 ESR1 TRANSFAC yes 70764409
chr5 172308947 172308951 ESR1 TRANSFAC yes 67838862
chr5 172308947 172308951 ESR1 TRANSFAC yes 70764410
chr5 172308948 172308958 SREBF1 JASPAR yes 67838863
chr5 172308948 172308958 SREBF2 JASPAR yes 67838864
chr5 172308948 172308958 SREBF1 JASPAR yes 70764411
chr5 172308948 172308958 SREBF2 JASPAR yes 70764412
chr5 172308965 172308979 JUN JASPAR yes 67838865
chr5 172308965 172308979 JUN JASPAR yes 70764413
chr5 172308967 172308978 BATF JASPAR yes 67838866
chr5 172308967 172308978 BATF JASPAR yes 70764414
chr5 172308969 172308980 JUND JASPAR yes 67838867
chr5 172308969 172308980 JUND JASPAR yes 70764415
chr5 172308971 172308983 PKNOX2 JASPAR yes 67838868
chr5 172308971 172308983 PKNOX2 JASPAR yes 70764416
chr5 172308998 172309009 ELK4 JASPAR yes 67838869
chr5 172308998 172309009 FLI1 JASPAR yes 67838870
chr5 172308998 172309009 ELK4 JASPAR yes 70764417
chr5 172308998 172309009 FLI1 JASPAR yes 70764418
chr5 172308998 172309011 ELF3 JASPAR yes 67838871
chr5 172308998 172309011 ELF3 JASPAR yes 70764419
chr5 172308999 172309009 ETV6 JASPAR yes 67838872
chr5 172308999 172309009 GABPA JASPAR yes 67838873
chr5 172308999 172309009 ETV6 JASPAR yes 70764420
chr5 172308999 172309009 GABPA JASPAR yes 70764421
chr5 172308999 172309010 ELF5 JASPAR yes 67838874
chr5 172308999 172309010 SPDEF JASPAR yes 67838875
chr5 172308999 172309010 ELF5 JASPAR yes 70764422
chr5 172308999 172309010 SPDEF JASPAR yes 70764423
chr5 172308999 172309011 EHF JASPAR yes 67838876
chr5 172308999 172309011 ELF1 JASPAR yes 67838877
chr5 172308999 172309011 ELF4 JASPAR yes 67838878
chr5 172308999 172309011 EHF JASPAR yes 70764424
chr5 172308999 172309011 ELF1 JASPAR yes 70764425
chr5 172308999 172309011 ELF4 JASPAR yes 70764426
chr5 172308999 172309012 ELF1 JASPAR yes 67838879
chr5 172308999 172309012 ELF1 JASPAR yes 70764427
chr5 172309000 172309007 SPI1 JASPAR yes 67838880
chr5 172309000 172309007 SPI1 JASPAR yes 70764428
chr5 172309000 172309008 EHF JASPAR yes 67838881
chr5 172309000 172309008 FEV JASPAR yes 67838882
chr5 172309000 172309008 EHF JASPAR yes 70764429
chr5 172309000 172309008 FEV JASPAR yes 70764430
chr5 172309006 172309019 SMAD2 JASPAR yes 67838883
chr5 172309006 172309019 SMAD2 JASPAR yes 70764431
chr5 172309010 172309014 NFE TRANSFAC yes 67838884
chr5 172309010 172309014 NFE TRANSFAC yes 70764432
chr5 172309011 172309022 USF1 JASPAR yes 67838885
chr5 172309011 172309022 USF2 JASPAR yes 67838886
chr5 172309011 172309022 USF1 JASPAR yes 70764433
chr5 172309011 172309022 USF2 JASPAR yes 70764434
chr5 172309011 172309031 TP53 JASPAR yes 67838887
chr5 172309011 172309031 TP53 JASPAR yes 70764435
chr5 172309012 172309022 TFEB JASPAR yes 67838888
chr5 172309012 172309022 TFEC JASPAR yes 67838889
chr5 172309012 172309022 TFEB JASPAR yes 70764436
chr5 172309012 172309022 TFEC JASPAR yes 70764437
chr5 172309014 172309026 TEAD1 JASPAR yes 67838890
chr5 172309014 172309026 TEAD1 JASPAR yes 70764438
chr5 172309045 172309048 MYB TRANSFAC yes 67838891
chr5 172309045 172309048 MYB TRANSFAC yes 70764439
chr5 172309050 172309054 YY1 TRANSFAC yes 67838892
chr5 172309050 172309054 YY1 TRANSFAC yes 70764440
chr5 172309064 172309082 MAFF JASPAR yes 67838893
chr5 172309064 172309082 MAFF JASPAR yes 70764441
chr5 172309066 172309077 NRL JASPAR yes 67838894
chr5 172309066 172309077 NRL JASPAR yes 70764442
chr5 172309066 172309081 MAFK JASPAR yes 67838895
chr5 172309066 172309081 MAFK JASPAR yes 70764443
chr5 172309067 172309081 JUN JASPAR yes 67838896
chr5 172309067 172309081 JUN JASPAR yes 70764444
chr5 172309069 172309080 BATF JASPAR yes 67838897
chr5 172309069 172309080 BATF JASPAR yes 70764445
chr5 172309070 172309081 FOSL2 JASPAR yes 67838898
chr5 172309070 172309081 JUNB JASPAR yes 67838899
chr5 172309070 172309081 NFE2L2 JASPAR yes 67838900
chr5 172309070 172309081 FOSL2 JASPAR yes 70764446
chr5 172309070 172309081 JUNB JASPAR yes 70764447
chr5 172309070 172309081 NFE2L2 JASPAR yes 70764448
chr5 172309071 172309082 FOS JASPAR yes 67838901
chr5 172309071 172309082 FOSL1 JASPAR yes 67838902
chr5 172309071 172309082 JUND JASPAR yes 67838903
chr5 172309071 172309082 FOS JASPAR yes 70764449
chr5 172309071 172309082 FOSL1 JASPAR yes 70764450
chr5 172309071 172309082 JUND JASPAR yes 70764451
chr5 172309072 172309083 FOSL2 JASPAR yes 67838904
chr5 172309072 172309083 JUNB JASPAR yes 67838905
chr5 172309072 172309083 FOSL2 JASPAR yes 70764452
chr5 172309072 172309083 JUNB JASPAR yes 70764453
chr5 172309072 172309086 JUN JASPAR yes 67838906
chr5 172309072 172309086 JUN JASPAR yes 70764454
chr5 172309081 172309095 TLX1 JASPAR yes 67838907
chr5 172309081 172309095 TLX1 JASPAR yes 70764455
chr5 172309081 172309096 RUNX2 JASPAR yes 67838908
chr5 172309081 172309096 RUNX2 JASPAR yes 70764456
chr5 172309090 172309094 ESR1 TRANSFAC yes 67838909
chr5 172309090 172309094 ESR1 TRANSFAC yes 70764457
chr5 172309120 172309141 ZNF263 JASPAR yes 67838910
chr5 172309120 172309141 ZNF263 JASPAR yes 70764458
chr5 172309123 172309137 PLAG1 JASPAR yes 67838911
chr5 172309123 172309137 PLAG1 JASPAR yes 70764459
chr5 172309152 172309167 RUNX2 JASPAR yes 67838912
chr5 172309152 172309167 RUNX2 JASPAR yes 70764460
chr5 172309183 172309199 SOX8 JASPAR yes 67838913
chr5 172309183 172309199 SOX8 JASPAR yes 70764461
chr5 172309227 172309233 TCF4 TRANSFAC yes 67838914
chr5 172309227 172309233 TCF4 TRANSFAC yes 70764462
chr5 172309235 172309240 NFY TRANSFAC yes 67838915
chr5 172309235 172309240 NFY TRANSFAC yes 70764463
chr5 172309237 172309243 NFIC JASPAR yes 67838916
chr5 172309237 172309243 NFIC JASPAR yes 70764464
chr5 172309266 172309284 IRF2 JASPAR yes 67838917
chr5 172309266 172309284 IRF2 JASPAR yes 70764465
chr5 172309267 172309288 IRF1 JASPAR yes 67838918
chr5 172309267 172309288 IRF1 JASPAR yes 70764466
chr5 172309269 172309284 PRDM1 JASPAR yes 67838919
chr5 172309269 172309284 STAT2 JASPAR yes 67838920
chr5 172309269 172309284 PRDM1 JASPAR yes 70764467
chr5 172309269 172309284 STAT2 JASPAR yes 70764468
chr5 172309270 172309284 STAT1 JASPAR yes 67838921
chr5 172309270 172309284 STAT1 JASPAR yes 70764469
chr5 172309271 172309283 IRF1 JASPAR yes 67838922
chr5 172309271 172309283 IRF1 JASPAR yes 70764470
chr5 172309276 172309280 YY1 TRANSFAC yes 67838923
chr5 172309276 172309280 YY1 TRANSFAC yes 70764471
chr5 172309280 172309286 MZF1 JASPAR yes 67838924
chr5 172309280 172309286 MZF1 JASPAR yes 70764472
chr5 172309286 172309290 NFE TRANSFAC yes 67838925
chr5 172309286 172309290 NFE TRANSFAC yes 70764473
chr5 172309336 172309350 POU4F1 JASPAR yes 67838926
chr5 172309336 172309350 POU4F1 JASPAR yes 70764474
chr5 172309340 172309350 POU6F1 JASPAR yes 67838927
chr5 172309340 172309350 POU6F1 JASPAR yes 70764475
chr5 172309341 172309357 POU4F3 JASPAR yes 67838928
chr5 172309341 172309357 POU4F3 JASPAR yes 70764476
chr5 172309342 172309352 PAX7 JASPAR yes 67838929
chr5 172309342 172309352 PAX7 JASPAR yes 70764477
chr5 172309345 172309359 RXRB JASPAR yes 67838930
chr5 172309345 172309359 RXRG JASPAR yes 67838931
chr5 172309345 172309359 RXRB JASPAR yes 70764478
chr5 172309345 172309359 RXRG JASPAR yes 70764479
chr5 172309345 172309360 HNF4G JASPAR yes 67838932
chr5 172309345 172309360 NR2C2 JASPAR yes 67838933
chr5 172309345 172309360 HNF4G JASPAR yes 70764480
chr5 172309345 172309360 NR2C2 JASPAR yes 70764481
chr5 172309358 172309362 H4TF2 TRANSFAC yes 67838934
chr5 172309358 172309362 H4TF2 TRANSFAC yes 70764482
chr5 172309363 172309367 NFE TRANSFAC yes 67838935
chr5 172309363 172309367 NFE TRANSFAC yes 70764483
chr5 172309367 172309387 ESR1 JASPAR yes 67838936
chr5 172309367 172309387 ESR1 JASPAR yes 70764484
chr5 172309386 172309398 TFAP2A JASPAR yes 67838937
chr5 172309386 172309398 TFAP2B JASPAR yes 67838938
chr5 172309386 172309398 TFAP2C JASPAR yes 67838939
chr5 172309386 172309398 TFAP2A JASPAR yes 70764485
chr5 172309386 172309398 TFAP2B JASPAR yes 70764486
chr5 172309386 172309398 TFAP2C JASPAR yes 70764487
chr5 172309393 172309397 LFA1 TRANSFAC yes 67838940
chr5 172309393 172309397 LFA1 TRANSFAC yes 70764488
chr5 172309405 172309412 NFATC2 JASPAR yes 67838941
chr5 172309405 172309412 NFATC2 JASPAR yes 70764489
chr5 172309469 172309482 NFKB1 JASPAR yes 67838942
chr5 172309469 172309482 NFKB1 JASPAR yes 70764490
chr5 172309484 172309493 THAP1 JASPAR yes 67838943
chr5 172309484 172309493 THAP1 JASPAR yes 70764491
chr5 172309487 172309491 LFA1 TRANSFAC yes 67838944
chr5 172309487 172309491 LFA1 TRANSFAC yes 70764492
chr5 172309503 172309518 HNF4A JASPAR yes 67838945
chr5 172309503 172309518 HNF4A JASPAR yes 70764493
chr5 172309509 172309520 FOXH1 JASPAR yes 67838946
chr5 172309509 172309520 FOXH1 JASPAR yes 70764494
SNP sites on vista50190[chr5:172308731-172309533]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 172308734 rs116674192 G A no 8706072
chr5 172308870 rs144529270 G T no 8706073
chr5 172308926 rs145691492 T C
ELF1 RUNX3
8706074
chr5 172308978 rs112418277 A T
BATF ELF1 JUN JUND PKNOX2 RUNX3
8706075
chr5 172309003 rs199581416 T TTCCTGGTC
EHF ELF1 ELF3 ELF4 ELF5 ELK4 ETV6 FEV FLI1 GABPA RUNX3 SPDEF SPI1
8706076
chr5 172309003 rs370534250 T TTCCTGGTC
EHF ELF1 ELF3 ELF4 ELF5 ELK4 ETV6 FEV FLI1 GABPA RUNX3 SPDEF SPI1
8706077
chr5 172309165 rs115918640 G A
RUNX2 RUNX3
8706078
chr5 172309169 rs116270817 G C
RUNX3
8706079
chr5 172309192 rs72811981 G A
RUNX3 SOX8
8706080
chr5 172309324 rs573819215 A G no 8706081
chr5 172309452 rs545252048 A G no 8706082
Genes possibly regulated by vista50190[chr5:172308731-172309533]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 172261278 172379688 + ERGIC1 ENSG00000113719.11 172261278 0.61 1.0 5986 52547
chr5 172385732 172396774 + RPL26L1 ENSG00000037241.3 172385732 0.85 0.99 5987 23801
Expression level of Genes
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miRNAs possibly regulated by vista50190[chr5:172308731-172309533]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results