EnhancerDB
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  3. rs199581416[chr5:172309003]
Enhancers that have rs199581416[chr5:172309003]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 172308731 172309533 vista50190
VISTA
Transcript factors that have rs199581416[chr5:172309003]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172308874 172309119 ELF1 UCSC Txn Factor no Conserved 108537526
chr5 172308913 172309271 RUNX3 UCSC Txn Factor no Conserved 108537527
chr5 172308998 172309009 ELK4 JASPAR yes 67838869
chr5 172308998 172309009 FLI1 JASPAR yes 67838870
chr5 172308998 172309009 ELK4 JASPAR yes 70764417
chr5 172308998 172309009 FLI1 JASPAR yes 70764418
chr5 172308998 172309011 ELF3 JASPAR yes 67838871
chr5 172308998 172309011 ELF3 JASPAR yes 70764419
chr5 172308999 172309009 ETV6 JASPAR yes 67838872
chr5 172308999 172309009 GABPA JASPAR yes 67838873
chr5 172308999 172309009 ETV6 JASPAR yes 70764420
chr5 172308999 172309009 GABPA JASPAR yes 70764421
chr5 172308999 172309010 ELF5 JASPAR yes 67838874
chr5 172308999 172309010 SPDEF JASPAR yes 67838875
chr5 172308999 172309010 ELF5 JASPAR yes 70764422
chr5 172308999 172309010 SPDEF JASPAR yes 70764423
chr5 172308999 172309011 EHF JASPAR yes 67838876
chr5 172308999 172309011 ELF1 JASPAR yes 67838877
chr5 172308999 172309011 ELF4 JASPAR yes 67838878
chr5 172308999 172309011 EHF JASPAR yes 70764424
chr5 172308999 172309011 ELF1 JASPAR yes 70764425
chr5 172308999 172309011 ELF4 JASPAR yes 70764426
chr5 172308999 172309012 ELF1 JASPAR yes 67838879
chr5 172308999 172309012 ELF1 JASPAR yes 70764427
chr5 172309000 172309007 SPI1 JASPAR yes 67838880
chr5 172309000 172309007 SPI1 JASPAR yes 70764428
chr5 172309000 172309008 EHF JASPAR yes 67838881
chr5 172309000 172309008 FEV JASPAR yes 67838882
chr5 172309000 172309008 EHF JASPAR yes 70764429
chr5 172309000 172309008 FEV JASPAR yes 70764430
Genes associated with rs199581416[chr5:172309003], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More