EnhancerDB
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  3. rs112418277[chr5:172308978]
Enhancers that have rs112418277[chr5:172308978]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 172308731 172309533 vista50190
VISTA
Transcript factors that have rs112418277[chr5:172308978]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172308874 172309119 ELF1 UCSC Txn Factor no Conserved 108537526
chr5 172308913 172309271 RUNX3 UCSC Txn Factor no Conserved 108537527
chr5 172308965 172308979 JUN JASPAR yes 67838865
chr5 172308965 172308979 JUN JASPAR yes 70764413
chr5 172308967 172308978 BATF JASPAR yes 67838866
chr5 172308967 172308978 BATF JASPAR yes 70764414
chr5 172308969 172308980 JUND JASPAR yes 67838867
chr5 172308969 172308980 JUND JASPAR yes 70764415
chr5 172308971 172308983 PKNOX2 JASPAR yes 67838868
chr5 172308971 172308983 PKNOX2 JASPAR yes 70764416
Genes associated with rs112418277[chr5:172308978], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More