EnhancerDB
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  3. vista50955[chr6:13409891-13410259]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50955[chr6:13409891-13410259]
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Tissue distribution of vista50955
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Transcription factor that possibly regulate vista50955[chr6:13409891-13410259]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 13409880 13409891 FOSL2 JASPAR yes 70315872
chr6 13409880 13409891 FOSL2 JASPAR yes 100027279
chr6 13409924 13409928 LFA1 TRANSFAC yes 70315873
chr6 13409924 13409928 LFA1 TRANSFAC yes 100027280
chr6 13409963 13409966 MYB TRANSFAC yes 70315874
chr6 13409963 13409966 MYB TRANSFAC yes 100027281
chr6 13409984 13409999 MEF2C JASPAR yes 70315875
chr6 13409984 13409999 MEF2C JASPAR yes 100027282
chr6 13409985 13410000 MEF2A JASPAR yes 70315876
chr6 13409985 13410000 MEF2A JASPAR yes 100027283
chr6 13409986 13409998 MEF2A JASPAR yes 70315877
chr6 13409986 13409998 MEF2B JASPAR yes 70315878
chr6 13409986 13409998 MEF2D JASPAR yes 70315879
chr6 13409986 13409998 MEF2A JASPAR yes 100027284
chr6 13409986 13409998 MEF2B JASPAR yes 100027285
chr6 13409986 13409998 MEF2D JASPAR yes 100027286
chr6 13410000 13410019 PAX5 JASPAR yes 70315880
chr6 13410000 13410019 PAX5 JASPAR yes 100027287
chr6 13410022 13410030 TBX5 JASPAR yes 70315881
chr6 13410022 13410030 TBX5 JASPAR yes 100027288
chr6 13410022 13410031 ZEB1 JASPAR yes 70315882
chr6 13410022 13410031 ZEB1 JASPAR yes 100027289
chr6 13410022 13410037 SCRT1 JASPAR yes 70315883
chr6 13410022 13410037 SCRT1 JASPAR yes 100027290
chr6 13410023 13410033 FIGLA JASPAR yes 70315884
chr6 13410023 13410033 ID4 JASPAR yes 70315885
chr6 13410023 13410033 TCF3 JASPAR yes 70315886
chr6 13410023 13410033 TCF4 JASPAR yes 70315887
chr6 13410023 13410033 FIGLA JASPAR yes 100027291
chr6 13410023 13410033 ID4 JASPAR yes 100027292
chr6 13410023 13410033 TCF3 JASPAR yes 100027293
chr6 13410023 13410033 TCF4 JASPAR yes 100027294
chr6 13410024 13410033 SNAI2 JASPAR yes 70315888
chr6 13410024 13410033 SNAI2 JASPAR yes 100027295
chr6 13410025 13410030 USF2 TRANSFAC yes 70315889
chr6 13410025 13410030 USF2 TRANSFAC yes 100027296
chr6 13410048 13410069 ZNF263 JASPAR yes 70315890
chr6 13410048 13410069 ZNF263 JASPAR yes 100027297
chr6 13410055 13410076 ZNF263 JASPAR yes 70315891
chr6 13410055 13410076 ZNF263 JASPAR yes 100027298
chr6 13410087 13410104 ESR1 JASPAR yes 70315892
chr6 13410087 13410104 ESR1 JASPAR yes 100027299
chr6 13410087 13410105 ESR2 JASPAR yes 70315893
chr6 13410087 13410105 ESR2 JASPAR yes 100027300
chr6 13410091 13410105 TLX1 JASPAR yes 70315894
chr6 13410091 13410105 TLX1 JASPAR yes 100027301
chr6 13410115 13410130 HNF4A JASPAR yes 70315895
chr6 13410115 13410130 HNF4A JASPAR yes 100027302
chr6 13410127 13410146 PAX5 JASPAR yes 70315896
chr6 13410127 13410146 PAX5 JASPAR yes 100027303
chr6 13410148 13410152 YY1 TRANSFAC yes 70315897
chr6 13410148 13410152 YY1 TRANSFAC yes 100027304
chr6 13410149 13410164 MEF2C JASPAR yes 70315898
chr6 13410149 13410164 MEF2C JASPAR yes 100027305
chr6 13410152 13410167 FOXP1 JASPAR yes 70315899
chr6 13410152 13410167 FOXP1 JASPAR yes 100027306
chr6 13410153 13410168 FOXP1 JASPAR yes 70315900
chr6 13410153 13410168 FOXP1 JASPAR yes 100027307
chr6 13410153 13410174 IRF1 JASPAR yes 70315901
chr6 13410153 13410174 IRF1 JASPAR yes 100027308
chr6 13410154 13410169 FOXP1 JASPAR yes 70315902
chr6 13410154 13410169 FOXP1 JASPAR yes 100027309
chr6 13410154 13410175 IRF1 JASPAR yes 70315903
chr6 13410154 13410175 IRF1 JASPAR yes 100027310
chr6 13410155 13410170 FOXP1 JASPAR yes 70315904
chr6 13410155 13410170 FOXP1 JASPAR yes 100027311
chr6 13410155 13410176 IRF1 JASPAR yes 70315905
chr6 13410155 13410176 IRF1 JASPAR yes 100027312
chr6 13410156 13410171 FOXP1 JASPAR yes 70315906
chr6 13410156 13410171 FOXP1 JASPAR yes 100027313
chr6 13410156 13410177 IRF1 JASPAR yes 70315907
chr6 13410156 13410177 IRF1 JASPAR yes 100027314
chr6 13410157 13410172 FOXP1 JASPAR yes 70315908
chr6 13410157 13410172 FOXP1 JASPAR yes 100027315
chr6 13410157 13410178 IRF1 JASPAR yes 70315909
chr6 13410157 13410178 IRF1 JASPAR yes 100027316
chr6 13410158 13410173 FOXP1 JASPAR yes 70315910
chr6 13410158 13410173 FOXP1 JASPAR yes 100027317
chr6 13410160 13410175 FOXP1 JASPAR yes 70315911
chr6 13410160 13410175 FOXP1 JASPAR yes 100027318
chr6 13410161 13410182 IRF1 JASPAR yes 70315912
chr6 13410161 13410182 IRF1 JASPAR yes 100027319
chr6 13410162 13410177 FOXP1 JASPAR yes 70315913
chr6 13410162 13410177 FOXP1 JASPAR yes 100027320
chr6 13410165 13410179 SPIC JASPAR yes 70315914
chr6 13410165 13410179 STAT1 JASPAR yes 70315915
chr6 13410165 13410179 SPIC JASPAR yes 100027321
chr6 13410165 13410179 STAT1 JASPAR yes 100027322
chr6 13410165 13410180 PRDM1 JASPAR yes 70315916
chr6 13410165 13410180 STAT2 JASPAR yes 70315917
chr6 13410165 13410180 PRDM1 JASPAR yes 100027323
chr6 13410165 13410180 STAT2 JASPAR yes 100027324
chr6 13410165 13410186 IRF1 JASPAR yes 70315918
chr6 13410165 13410186 IRF1 JASPAR yes 100027325
chr6 13410169 13410190 IRF1 JASPAR yes 70315919
chr6 13410169 13410190 IRF1 JASPAR yes 100027326
chr6 13410173 13410187 STAT1 JASPAR yes 70315920
chr6 13410173 13410187 STAT1 JASPAR yes 100027327
chr6 13410173 13410188 STAT2 JASPAR yes 70315921
chr6 13410173 13410188 STAT2 JASPAR yes 100027328
chr6 13410175 13410196 IRF1 JASPAR yes 70315922
chr6 13410175 13410196 IRF1 JASPAR yes 100027329
chr6 13410188 13410193 MYB TRANSFAC yes 70315923
chr6 13410188 13410193 MYB TRANSFAC yes 100027330
chr6 13410225 13410246 IRF1 JASPAR yes 70315924
chr6 13410225 13410246 IRF1 JASPAR yes 100027331
chr6 13410231 13410252 IRF1 JASPAR yes 70315925
chr6 13410231 13410252 IRF1 JASPAR yes 100027332
chr6 13410232 13410253 IRF1 JASPAR yes 70315926
chr6 13410232 13410253 IRF1 JASPAR yes 100027333
chr6 13410233 13410248 STAT2 JASPAR yes 70315927
chr6 13410233 13410248 STAT2 JASPAR yes 100027334
chr6 13410234 13410255 IRF1 JASPAR yes 70315928
chr6 13410234 13410255 IRF1 JASPAR yes 100027335
chr6 13410235 13410256 IRF1 JASPAR yes 70315929
chr6 13410235 13410256 IRF1 JASPAR yes 100027336
chr6 13410236 13410251 FOXP1 JASPAR yes 70315930
chr6 13410236 13410251 FOXP1 JASPAR yes 100027337
chr6 13410236 13410257 IRF1 JASPAR yes 70315931
chr6 13410236 13410257 IRF1 JASPAR yes 100027338
chr6 13410237 13410252 FOXP1 JASPAR yes 70315932
chr6 13410237 13410252 FOXP1 JASPAR yes 100027339
chr6 13410237 13410258 IRF1 JASPAR yes 70315933
chr6 13410237 13410258 IRF1 JASPAR yes 100027340
chr6 13410238 13410253 FOXP1 JASPAR yes 70315934
chr6 13410238 13410253 FOXP1 JASPAR yes 100027341
chr6 13410239 13410254 FOXP1 JASPAR yes 70315935
chr6 13410239 13410254 FOXP1 JASPAR yes 100027342
chr6 13410240 13410255 FOXP1 JASPAR yes 70315936
chr6 13410240 13410255 FOXP1 JASPAR yes 100027343
chr6 13410241 13410256 FOXP1 JASPAR yes 70315937
chr6 13410241 13410256 FOXP1 JASPAR yes 100027344
chr6 13410241 13410262 IRF1 JASPAR yes 70315938
chr6 13410241 13410262 IRF1 JASPAR yes 100027345
chr6 13410242 13410257 FOXP1 JASPAR yes 70315939
chr6 13410242 13410257 FOXP1 JASPAR yes 100027346
chr6 13410243 13410258 FOXP1 JASPAR yes 70315940
chr6 13410243 13410258 FOXP1 JASPAR yes 100027347
chr6 13410244 13410259 FOXP1 JASPAR yes 70315941
chr6 13410244 13410259 FOXP1 JASPAR yes 100027348
chr6 13410246 13410261 MEF2A JASPAR yes 70315942
chr6 13410246 13410261 MEF2A JASPAR yes 100027349
chr6 13410247 13410262 MEF2C JASPAR yes 70315943
chr6 13410247 13410262 MEF2C JASPAR yes 100027350
chr6 13410249 13410264 FOXP1 JASPAR yes 70315944
chr6 13410249 13410264 FOXP1 JASPAR yes 100027351
chr6 13410258 13410263 NFY TRANSFAC yes 70315945
chr6 13410258 13410263 NFY TRANSFAC yes 100027352
SNP sites on vista50955[chr6:13409891-13410259]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 13409940 rs188093230 T C no 8844077
chr6 13409941 rs550403 T C no 8844078
chr6 13409969 rs569874517 C G no 8844079
chr6 13410108 rs572048342 T G no 8844080
chr6 13410110 rs142886411 G A no 8844081
chr6 13410162 rs200870698 AAAAAAAAAAAG A
FOXP1 IRF1 MEF2C
8844082
chr6 13410162 rs869222607 AAAAAAAAAAAG A
FOXP1 IRF1 MEF2C
8844083
chr6 13410229 rs547529826 G GA
IRF1
8844084
chr6 13410237 rs386406211 G GTT
FOXP1 IRF1 STAT2
8844085
chr6 13410237 rs386406212 G GTT
FOXP1 IRF1 STAT2
8844086
chr6 13410237 rs548597430 G GTT,GTTT
FOXP1 IRF1 STAT2
8844087
chr6 13410237 rs56252038 G GTT
FOXP1 IRF1 STAT2
8844088
Genes possibly regulated by vista50955[chr6:13409891-13410259]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 13266774 13328815 - TBC1D7 ENSG00000145979.13 13328815 0.85 0.99 6165 18924
chr6 13358062 13487894 - GFOD1 ENSG00000145990.6 13487894 0.75 0.98 6166 22365
chr6 13469513 13486415 - AL583828.1 ENSG00000187461.5 13486415 1.0 0.91 6167 23844
Expression level of Genes
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miRNAs possibly regulated by vista50955[chr6:13409891-13410259]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results