EnhancerDB
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  3. rs548597430[chr6:13410237]
Enhancers that have rs548597430[chr6:13410237]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13393585 13416889 enh8961
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 13409891 13410259 vista50955
VISTA
Transcript factors that have rs548597430[chr6:13410237]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13410225 13410246 IRF1 JASPAR yes 70315924
chr6 13410225 13410246 IRF1 JASPAR yes 100027331
chr6 13410231 13410252 IRF1 JASPAR yes 70315925
chr6 13410231 13410252 IRF1 JASPAR yes 100027332
chr6 13410232 13410253 IRF1 JASPAR yes 70315926
chr6 13410232 13410253 IRF1 JASPAR yes 100027333
chr6 13410233 13410248 STAT2 JASPAR yes 70315927
chr6 13410233 13410248 STAT2 JASPAR yes 100027334
chr6 13410234 13410255 IRF1 JASPAR yes 70315928
chr6 13410234 13410255 IRF1 JASPAR yes 100027335
chr6 13410235 13410256 IRF1 JASPAR yes 70315929
chr6 13410235 13410256 IRF1 JASPAR yes 100027336
chr6 13410236 13410251 FOXP1 JASPAR yes 70315930
chr6 13410236 13410251 FOXP1 JASPAR yes 100027337
chr6 13410236 13410257 IRF1 JASPAR yes 70315931
chr6 13410236 13410257 IRF1 JASPAR yes 100027338
chr6 13410237 13410252 FOXP1 JASPAR yes 70315932
chr6 13410237 13410252 FOXP1 JASPAR yes 100027339
chr6 13410237 13410258 IRF1 JASPAR yes 70315933
chr6 13410237 13410258 IRF1 JASPAR yes 100027340
Genes associated with rs548597430[chr6:13410237], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More