EnhancerDB
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  3. rs200870698[chr6:13410162]
Enhancers that have rs200870698[chr6:13410162]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13393585 13416889 enh8961
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 13409891 13410259 vista50955
VISTA
Transcript factors that have rs200870698[chr6:13410162]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13410149 13410164 MEF2C JASPAR yes 70315898
chr6 13410149 13410164 MEF2C JASPAR yes 100027305
chr6 13410152 13410167 FOXP1 JASPAR yes 70315899
chr6 13410152 13410167 FOXP1 JASPAR yes 100027306
chr6 13410153 13410168 FOXP1 JASPAR yes 70315900
chr6 13410153 13410168 FOXP1 JASPAR yes 100027307
chr6 13410153 13410174 IRF1 JASPAR yes 70315901
chr6 13410153 13410174 IRF1 JASPAR yes 100027308
chr6 13410154 13410169 FOXP1 JASPAR yes 70315902
chr6 13410154 13410169 FOXP1 JASPAR yes 100027309
chr6 13410154 13410175 IRF1 JASPAR yes 70315903
chr6 13410154 13410175 IRF1 JASPAR yes 100027310
chr6 13410155 13410170 FOXP1 JASPAR yes 70315904
chr6 13410155 13410170 FOXP1 JASPAR yes 100027311
chr6 13410155 13410176 IRF1 JASPAR yes 70315905
chr6 13410155 13410176 IRF1 JASPAR yes 100027312
chr6 13410156 13410171 FOXP1 JASPAR yes 70315906
chr6 13410156 13410171 FOXP1 JASPAR yes 100027313
chr6 13410156 13410177 IRF1 JASPAR yes 70315907
chr6 13410156 13410177 IRF1 JASPAR yes 100027314
chr6 13410157 13410172 FOXP1 JASPAR yes 70315908
chr6 13410157 13410172 FOXP1 JASPAR yes 100027315
chr6 13410157 13410178 IRF1 JASPAR yes 70315909
chr6 13410157 13410178 IRF1 JASPAR yes 100027316
chr6 13410158 13410173 FOXP1 JASPAR yes 70315910
chr6 13410158 13410173 FOXP1 JASPAR yes 100027317
chr6 13410160 13410175 FOXP1 JASPAR yes 70315911
chr6 13410160 13410175 FOXP1 JASPAR yes 100027318
chr6 13410161 13410182 IRF1 JASPAR yes 70315912
chr6 13410161 13410182 IRF1 JASPAR yes 100027319
chr6 13410162 13410177 FOXP1 JASPAR yes 70315913
chr6 13410162 13410177 FOXP1 JASPAR yes 100027320
Genes associated with rs200870698[chr6:13410162], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More