EnhancerDB
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  3. vista5109[chr1:218642170-218642366]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5109[chr1:218642170-218642366]
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Tissue distribution of vista5109
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Transcription factor that possibly regulate vista5109[chr1:218642170-218642366]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 218642186 218642199 ELF1 JASPAR yes 35382846
chr1 218642186 218642199 ELF1 JASPAR yes 118458964
chr1 218642186 218642200 SPI1 JASPAR yes 35382847
chr1 218642186 218642200 SPIC JASPAR yes 35382848
chr1 218642186 218642200 SPI1 JASPAR yes 118458965
chr1 218642186 218642200 SPIC JASPAR yes 118458966
chr1 218642187 218642194 SPI1 JASPAR yes 35382849
chr1 218642187 218642194 SPI1 JASPAR yes 118458967
chr1 218642187 218642195 EHF JASPAR yes 35382850
chr1 218642187 218642195 EHF JASPAR yes 118458968
chr1 218642189 218642196 SPIB JASPAR yes 35382851
chr1 218642189 218642196 SPIB JASPAR yes 118458969
chr1 218642194 218642203 SOX9 JASPAR yes 35382852
chr1 218642194 218642203 SOX9 JASPAR yes 118458970
chr1 218642196 218642205 SRY JASPAR yes 35382853
chr1 218642196 218642205 SRY JASPAR yes 118458971
chr1 218642201 218642205 YY1 TRANSFAC yes 35382854
chr1 218642201 218642205 YY1 TRANSFAC yes 118458972
chr1 218642202 218642217 STAT1 JASPAR yes 35382855
chr1 218642202 218642217 STAT1 JASPAR yes 118458973
chr1 218642204 218642215 STAT1 JASPAR yes 35382856
chr1 218642204 218642215 STAT3 JASPAR yes 35382857
chr1 218642204 218642215 STAT1 JASPAR yes 118458974
chr1 218642204 218642215 STAT3 JASPAR yes 118458975
chr1 218642230 218642240 GABPA JASPAR yes 35382858
chr1 218642230 218642240 GABPA JASPAR yes 118458976
chr1 218642233 218642238 ETS2 TRANSFAC yes 35382859
chr1 218642233 218642238 ETS2 TRANSFAC yes 118458977
chr1 218642239 218642253 SPI1 JASPAR yes 35382860
chr1 218642239 218642253 SPI1 JASPAR yes 118458978
chr1 218642256 218642266 ALX3 JASPAR yes 35382861
chr1 218642256 218642266 EMX2 JASPAR yes 35382862
chr1 218642256 218642266 EVX2 JASPAR yes 35382863
chr1 218642256 218642266 GSX1 JASPAR yes 35382864
chr1 218642256 218642266 GSX2 JASPAR yes 35382865
chr1 218642256 218642266 HOXA2 JASPAR yes 35382866
chr1 218642256 218642266 HOXB2 JASPAR yes 35382867
chr1 218642256 218642266 HOXB3 JASPAR yes 35382868
chr1 218642256 218642266 MEOX1 JASPAR yes 35382869
chr1 218642256 218642266 ALX3 JASPAR yes 118458979
chr1 218642256 218642266 EMX2 JASPAR yes 118458980
chr1 218642256 218642266 EVX2 JASPAR yes 118458981
chr1 218642256 218642266 GSX1 JASPAR yes 118458982
chr1 218642256 218642266 GSX2 JASPAR yes 118458983
chr1 218642256 218642266 HOXA2 JASPAR yes 118458984
chr1 218642256 218642266 HOXB2 JASPAR yes 118458985
chr1 218642256 218642266 HOXB3 JASPAR yes 118458986
chr1 218642256 218642266 MEOX1 JASPAR yes 118458987
chr1 218642257 218642265 DLX6 JASPAR yes 35382870
chr1 218642257 218642265 EN1 JASPAR yes 35382871
chr1 218642257 218642265 LBX1 JASPAR yes 35382872
chr1 218642257 218642265 PAX4 JASPAR yes 35382873
chr1 218642257 218642265 PDX1 JASPAR yes 35382874
chr1 218642257 218642265 VAX1 JASPAR yes 35382875
chr1 218642257 218642265 VAX2 JASPAR yes 35382876
chr1 218642257 218642265 VSX1 JASPAR yes 35382877
chr1 218642257 218642265 VSX2 JASPAR yes 35382878
chr1 218642257 218642265 DLX6 JASPAR yes 118458988
chr1 218642257 218642265 EN1 JASPAR yes 118458989
chr1 218642257 218642265 LBX1 JASPAR yes 118458990
chr1 218642257 218642265 PAX4 JASPAR yes 118458991
chr1 218642257 218642265 PDX1 JASPAR yes 118458992
chr1 218642257 218642265 VAX1 JASPAR yes 118458993
chr1 218642257 218642265 VAX2 JASPAR yes 118458994
chr1 218642257 218642265 VSX1 JASPAR yes 118458995
chr1 218642257 218642265 VSX2 JASPAR yes 118458996
chr1 218642271 218642274 MYB TRANSFAC yes 35382879
chr1 218642271 218642274 MYB TRANSFAC yes 118458997
chr1 218642308 218642326 ESR2 JASPAR yes 35382880
chr1 218642308 218642326 ESR2 JASPAR yes 118458998
chr1 218642311 218642315 ESR1 TRANSFAC yes 35382881
chr1 218642311 218642315 ESR1 TRANSFAC yes 118458999
chr1 218642311 218642322 USF1 JASPAR yes 35382882
chr1 218642311 218642322 USF2 JASPAR yes 35382883
chr1 218642311 218642322 USF1 JASPAR yes 118459000
chr1 218642311 218642322 USF2 JASPAR yes 118459001
chr1 218642312 218642319 USF2 TRANSFAC yes 35382884
chr1 218642312 218642319 USF2 TRANSFAC yes 118459002
chr1 218642312 218642322 SREBF1 JASPAR yes 35382885
chr1 218642312 218642322 SREBF2 JASPAR yes 35382886
chr1 218642312 218642322 TFEC JASPAR yes 35382887
chr1 218642312 218642322 SREBF1 JASPAR yes 118459003
chr1 218642312 218642322 SREBF2 JASPAR yes 118459004
chr1 218642312 218642322 TFEC JASPAR yes 118459005
chr1 218642312 218642323 USF1 JASPAR yes 35382888
chr1 218642312 218642323 USF1 JASPAR yes 118459006
chr1 218642314 218642319 USF2 TRANSFAC yes 35382889
chr1 218642314 218642319 USF2 TRANSFAC yes 118459007
chr1 218642314 218642327 NR2F1 JASPAR yes 35382890
chr1 218642314 218642327 NR2F1 JASPAR yes 118459008
chr1 218642315 218642333 RARA JASPAR yes 35382891
chr1 218642315 218642333 RARA JASPAR yes 118459009
chr1 218642316 218642327 ESRRA JASPAR yes 35382892
chr1 218642316 218642327 ESRRA JASPAR yes 118459010
chr1 218642317 218642325 NR4A2 JASPAR yes 35382893
chr1 218642317 218642325 NR4A2 JASPAR yes 118459011
chr1 218642318 218642328 RORA JASPAR yes 35382894
chr1 218642318 218642328 RORA JASPAR yes 118459012
chr1 218642338 218642351 POU3F3 JASPAR yes 35382895
chr1 218642338 218642351 POU3F3 JASPAR yes 118459013
chr1 218642345 218642359 SPI1 JASPAR yes 35382896
chr1 218642345 218642359 SPI1 JASPAR yes 118459014
SNP sites on vista5109[chr1:218642170-218642366]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 218642197 rs147664549 A G
ELF1 SOX9 SPI1 SPIC SRY
949402
chr1 218642333 rs143263961 A G,T
RARA
949403
Genes possibly regulated by vista5109[chr1:218642170-218642366]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 218683438 218699320 + C1orf143 ENSG00000228208.2 218683438 0.97 0.94 1850 58928
Expression level of Genes
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miRNAs possibly regulated by vista5109[chr1:218642170-218642366]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results