EnhancerDB
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  3. rs147664549[chr1:218642197]
Enhancers that have rs147664549[chr1:218642197]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218626305 218642655 enh27510
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 218642170 218642366 vista5109
VISTA
Transcript factors that have rs147664549[chr1:218642197]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218641405 218643036 TEF1 GTRD no Bone (Osteoblast) 21380784
chr1 218641405 218643036 TEF1 GTRD no Bone (Osteoblast) 107870343
chr1 218641938 218642595 ZNF143 GTRD no Epithelial (MCF-7) 21380785
chr1 218641938 218642595 ZNF143 GTRD no Epithelial (MCF-7) 107870344
chr1 218641966 218642350 ZNF274 GTRD no Cervix (HeLa-S3) 21380786
chr1 218641966 218642350 ZNF274 GTRD no Cervix (HeLa-S3) 107870345
chr1 218641971 218642291 ZNF274 GTRD no Liver (HepG2) 107870346
chr1 218641984 218643664 ZNF143 GTRD no Epithelial (MCF-7) 21380787
chr1 218641984 218643664 ZNF143 GTRD no Epithelial (MCF-7) 107870347
chr1 218641999 218642437 ZBTB33 GTRD no Lung (A549) 107870348
chr1 218642162 218643198 ZNF143 GTRD no Epithelial (MCF-7) 21380788
chr1 218642162 218643198 ZNF143 GTRD no Epithelial (MCF-7) 107870349
chr1 218642186 218642199 ELF1 JASPAR yes 35382846
chr1 218642186 218642199 ELF1 JASPAR yes 118458964
chr1 218642186 218642200 SPI1 JASPAR yes 35382847
chr1 218642186 218642200 SPIC JASPAR yes 35382848
chr1 218642186 218642200 SPI1 JASPAR yes 118458965
chr1 218642186 218642200 SPIC JASPAR yes 118458966
chr1 218642194 218642203 SOX9 JASPAR yes 35382852
chr1 218642194 218642203 SOX9 JASPAR yes 118458970
chr1 218642196 218642205 SRY JASPAR yes 35382853
chr1 218642196 218642205 SRY JASPAR yes 118458971
Genes associated with rs147664549[chr1:218642197], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More