EnhancerDB
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  3. rs143263961[chr1:218642333]
Enhancers that have rs143263961[chr1:218642333]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218626305 218642655 enh27510
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 218642170 218642366 vista5109
VISTA
Transcript factors that have rs143263961[chr1:218642333]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218641405 218643036 TEF1 GTRD no Bone (Osteoblast) 21380784
chr1 218641405 218643036 TEF1 GTRD no Bone (Osteoblast) 107870343
chr1 218641938 218642595 ZNF143 GTRD no Epithelial (MCF-7) 21380785
chr1 218641938 218642595 ZNF143 GTRD no Epithelial (MCF-7) 107870344
chr1 218641966 218642350 ZNF274 GTRD no Cervix (HeLa-S3) 21380786
chr1 218641966 218642350 ZNF274 GTRD no Cervix (HeLa-S3) 107870345
chr1 218641984 218643664 ZNF143 GTRD no Epithelial (MCF-7) 21380787
chr1 218641984 218643664 ZNF143 GTRD no Epithelial (MCF-7) 107870347
chr1 218641999 218642437 ZBTB33 GTRD no Lung (A549) 107870348
chr1 218642162 218643198 ZNF143 GTRD no Epithelial (MCF-7) 21380788
chr1 218642162 218643198 ZNF143 GTRD no Epithelial (MCF-7) 107870349
chr1 218642209 218642756 ZNF274 GTRD no Bone Marrow (K562) 107870350
chr1 218642244 218643152 ZNF143 GTRD no Epithelial (MCF-7) 21380789
chr1 218642244 218643152 ZNF143 GTRD no Epithelial (MCF-7) 107870351
chr1 218642249 218643097 ZNF143 GTRD no Epithelial (MCF-7) 21380790
chr1 218642249 218643097 ZNF143 GTRD no Epithelial (MCF-7) 107870352
chr1 218642253 218643191 ZNF143 GTRD no Epithelial (MCF-7) 21380791
chr1 218642253 218643191 ZNF143 GTRD no Epithelial (MCF-7) 107870353
chr1 218642281 218642991 ZNF143 GTRD no Epithelial (MCF-7) 21380792
chr1 218642281 218642991 ZNF143 GTRD no Epithelial (MCF-7) 107870354
chr1 218642315 218642333 RARA JASPAR yes 35382891
chr1 218642315 218642333 RARA JASPAR yes 118459009
Genes associated with rs143263961[chr1:218642333], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More