EnhancerDB
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  3. vista51550[chr6:30787859-30788252]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51550[chr6:30787859-30788252]
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Tissue distribution of vista51550
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Transcription factor that possibly regulate vista51550[chr6:30787859-30788252]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 30787766 30788518 POLR2A UCSC Txn Factor no Conserved 108539554
chr6 30788089 30788341 RAD21 UCSC Txn Factor no Conserved 108539555
chr6 30787848 30787861 NR2F1 JASPAR yes 70344994
chr6 30787848 30787861 NR2F1 JASPAR yes 101054748
chr6 30787853 30787863 TFAP4 JASPAR yes 70344995
chr6 30787853 30787863 TFAP4 JASPAR yes 101054750
chr6 30787892 30787906 TLX1 JASPAR yes 70344996
chr6 30787892 30787906 TLX1 JASPAR yes 101054751
chr6 30787899 30787920 ZNF263 JASPAR yes 70344997
chr6 30787899 30787920 ZNF263 JASPAR yes 101054752
chr6 30787909 30787930 ZNF263 JASPAR yes 70344998
chr6 30787909 30787930 ZNF263 JASPAR yes 101054753
chr6 30787943 30787949 ZNF354C JASPAR yes 70344999
chr6 30787943 30787949 ZNF354C JASPAR yes 101054754
chr6 30787946 30787951 H4TF1 TRANSFAC yes 70345000
chr6 30787946 30787951 H4TF1 TRANSFAC yes 101054755
chr6 30787964 30787985 ZNF263 JASPAR yes 70345001
chr6 30787964 30787985 ZNF263 JASPAR yes 101054756
chr6 30788023 30788028 ETS2 TRANSFAC yes 70345002
chr6 30788023 30788028 ETS2 TRANSFAC yes 101054757
chr6 30788023 30788031 EHF JASPAR yes 70345003
chr6 30788023 30788031 EHF JASPAR yes 101054758
chr6 30788027 30788042 SCRT1 JASPAR yes 70345004
chr6 30788027 30788042 SCRT1 JASPAR yes 101054759
chr6 30788029 30788042 SCRT2 JASPAR yes 70345005
chr6 30788029 30788042 SCRT2 JASPAR yes 101054760
chr6 30788053 30788068 MAFK JASPAR yes 70345006
chr6 30788053 30788068 MAFK JASPAR yes 101054761
chr6 30788057 30788068 NRL JASPAR yes 70345007
chr6 30788057 30788068 NRL JASPAR yes 101054762
chr6 30788069 30788090 ZNF263 JASPAR yes 70345008
chr6 30788069 30788090 ZNF263 JASPAR yes 101054763
chr6 30788075 30788081 YY1 JASPAR yes 70345009
chr6 30788075 30788081 YY1 JASPAR yes 101054764
chr6 30788089 30788101 HINFP JASPAR yes 70345010
chr6 30788089 30788101 HINFP JASPAR yes 101054765
chr6 30788092 30788096 H4TF2 TRANSFAC yes 70345011
chr6 30788092 30788096 H4TF2 TRANSFAC yes 101054766
chr6 30788103 30788109 TCF4 TRANSFAC yes 70345012
chr6 30788103 30788109 TCF4 TRANSFAC yes 101054767
chr6 30788118 30788122 H4TF2 TRANSFAC yes 70345013
chr6 30788118 30788122 H4TF2 TRANSFAC yes 101054768
chr6 30788122 30788135 ELF3 JASPAR yes 70345014
chr6 30788122 30788135 ELF3 JASPAR yes 101054769
chr6 30788123 30788133 GABPA JASPAR yes 70345015
chr6 30788123 30788133 GABPA JASPAR yes 101054770
chr6 30788123 30788134 ELF5 JASPAR yes 70345016
chr6 30788123 30788134 ELF5 JASPAR yes 101054771
chr6 30788123 30788136 ELF1 JASPAR yes 70345017
chr6 30788123 30788136 ELF1 JASPAR yes 101054772
chr6 30788125 30788140 RFX5 JASPAR yes 70345018
chr6 30788125 30788140 RFX5 JASPAR yes 101054773
chr6 30788129 30788142 EOMES JASPAR yes 70345019
chr6 30788129 30788142 EOMES JASPAR yes 101054774
chr6 30788131 30788135 ESR1 TRANSFAC yes 70345020
chr6 30788131 30788135 ESR1 TRANSFAC yes 101054775
chr6 30788132 30788142 TBX21 JASPAR yes 70345021
chr6 30788132 30788142 TBX21 JASPAR yes 101054776
chr6 30788133 30788141 MGA JASPAR yes 70345022
chr6 30788133 30788141 TBX15 JASPAR yes 70345023
chr6 30788133 30788141 TBX1 JASPAR yes 70345024
chr6 30788133 30788141 TBX4 JASPAR yes 70345025
chr6 30788133 30788141 TBX5 JASPAR yes 70345026
chr6 30788133 30788141 MGA JASPAR yes 101054777
chr6 30788133 30788141 TBX15 JASPAR yes 101054778
chr6 30788133 30788141 TBX1 JASPAR yes 101054779
chr6 30788133 30788141 TBX4 JASPAR yes 101054780
chr6 30788133 30788141 TBX5 JASPAR yes 101054781
chr6 30788158 30788172 JUN JASPAR yes 70345027
chr6 30788158 30788172 JUN JASPAR yes 101054782
chr6 30788161 30788172 FOSL2 JASPAR yes 70345028
chr6 30788161 30788172 JUNB JASPAR yes 70345029
chr6 30788161 30788172 FOSL2 JASPAR yes 101054783
chr6 30788161 30788172 JUNB JASPAR yes 101054784
chr6 30788162 30788173 FOSL1 JASPAR yes 70345030
chr6 30788162 30788173 JUND JASPAR yes 70345031
chr6 30788162 30788173 FOSL1 JASPAR yes 101054785
chr6 30788162 30788173 JUND JASPAR yes 101054786
chr6 30788163 30788170 JUN TRANSFAC yes 70345032
chr6 30788163 30788170 JUN TRANSFAC yes 101054787
chr6 30788163 30788174 NFE2L2 JASPAR yes 70345033
chr6 30788163 30788174 NFE2L2 JASPAR yes 101054788
chr6 30788179 30788184 GATA2 JASPAR yes 70345034
chr6 30788179 30788184 GATA2 JASPAR yes 101054789
chr6 30788182 30788186 TEAD2 TRANSFAC yes 70345035
chr6 30788182 30788186 TEAD2 TRANSFAC yes 101054790
chr6 30788182 30788187 TBP TRANSFAC yes 70345036
chr6 30788182 30788187 TBP TRANSFAC yes 101054791
chr6 30788182 30788188 TMF TRANSFAC yes 70345037
chr6 30788182 30788188 TMF TRANSFAC yes 101054792
chr6 30788187 30788200 SMAD2 JASPAR yes 70345038
chr6 30788187 30788200 SMAD2 JASPAR yes 101054793
chr6 30788192 30788213 IRF1 JASPAR yes 70345039
chr6 30788192 30788213 IRF1 JASPAR yes 101054794
chr6 30788213 30788219 TCF4 TRANSFAC yes 70345040
chr6 30788213 30788219 TCF4 TRANSFAC yes 101054795
chr6 30788218 30788224 LEF1 TRANSFAC yes 70345041
chr6 30788218 30788224 TCF4 TRANSFAC yes 70345042
chr6 30788218 30788224 LEF1 TRANSFAC yes 101054796
chr6 30788218 30788224 TCF4 TRANSFAC yes 101054797
chr6 30788233 30788239 NFE2 TRANSFAC yes 70345043
chr6 30788233 30788239 NFE2 TRANSFAC yes 101054798
chr6 30788234 30788245 TFAP2A JASPAR yes 70345044
chr6 30788234 30788245 TFAP2C JASPAR yes 70345045
chr6 30788234 30788245 TFAP2A JASPAR yes 101054799
chr6 30788234 30788245 TFAP2C JASPAR yes 101054800
SNP sites on vista51550[chr6:30787859-30788252]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 30787915 rs4713386 A G
POLR2A ZNF263
8949895
chr6 30787933 rs145165526 G A
POLR2A
8949896
chr6 30788084 rs114443734 C T
POLR2A ZNF263
8949897
chr6 30788191 rs3094111 T C
POLR2A RAD21 SMAD2
8949898
chr6 30788195 rs62408728 G A
IRF1 POLR2A RAD21 SMAD2
8949899
chr6 30788238 rs527700809 C T
NFE2 POLR2A RAD21 TFAP2A TFAP2C
8949900
Genes possibly regulated by vista51550[chr6:30787859-30788252]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30687978 30693203 + TUBB ENSG00000196230.8 30687978 0.8 0.77 6350 119
chr6 30695486 30710510 - FLOT1 ENSG00000137312.10 30710510 0.61 0.86 6351 22651
chr6 30710976 30712331 - IER3 ENSG00000137331.11 30712331 0.82 0.96 6352 24472
chr6 30844198 30867933 + DDR1 ENSG00000204580.7 30844198 0.83 0.82 6353 44054
chr6 30875961 30881883 + GTF2H4 ENSG00000213780.6 30875961 0.64 0.83 6354 12291
chr6 30876019 30894236 + VARS2 ENSG00000137411.12 30876019 0.64 0.72 6355 12233
Expression level of Genes
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miRNAs possibly regulated by vista51550[chr6:30787859-30788252]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results