EnhancerDB
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  3. rs527700809[chr6:30788238]
Enhancers that have rs527700809[chr6:30788238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 30787859 30788252 vista51550
VISTA
Transcript factors that have rs527700809[chr6:30788238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30787766 30788518 POLR2A UCSC Txn Factor no Conserved 108539554
chr6 30788089 30788341 RAD21 UCSC Txn Factor no Conserved 108539555
chr6 30788233 30788239 NFE2 TRANSFAC yes 70345043
chr6 30788233 30788239 NFE2 TRANSFAC yes 101054798
chr6 30788234 30788245 TFAP2A JASPAR yes 70345044
chr6 30788234 30788245 TFAP2C JASPAR yes 70345045
chr6 30788234 30788245 TFAP2A JASPAR yes 101054799
chr6 30788234 30788245 TFAP2C JASPAR yes 101054800
Genes associated with rs527700809[chr6:30788238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More