EnhancerDB
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  3. vista51552[chr6:30796195-30796565]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51552[chr6:30796195-30796565]
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Tissue distribution of vista51552
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Transcription factor that possibly regulate vista51552[chr6:30796195-30796565]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 30796232 30796652 CTCF UCSC Txn Factor no Conserved 108539557
chr6 30796237 30796713 MAFK UCSC Txn Factor no Conserved 108539558
chr6 30796256 30796592 MAFF UCSC Txn Factor no Conserved 108539559
chr6 30796311 30796581 SMC3 UCSC Txn Factor no Conserved 108539560
chr6 30796316 30796581 RAD21 UCSC Txn Factor no Conserved 108539561
chr6 30796212 30796222 RORA JASPAR yes 70345095
chr6 30796212 30796222 RORA JASPAR yes 101056111
chr6 30796225 30796238 SMAD2 JASPAR yes 70345096
chr6 30796225 30796238 SMAD2 JASPAR yes 101056112
chr6 30796229 30796233 NFE TRANSFAC yes 70345097
chr6 30796229 30796233 NFE TRANSFAC yes 101056113
chr6 30796231 30796242 EBF1 JASPAR yes 70345098
chr6 30796231 30796242 EBF1 JASPAR yes 101056114
chr6 30796244 30796262 NR3C1 JASPAR yes 70345099
chr6 30796244 30796262 NR3C1 JASPAR yes 101056115
chr6 30796256 30796260 H4TF2 TRANSFAC yes 70345100
chr6 30796256 30796260 H4TF2 TRANSFAC yes 101056116
chr6 30796267 30796271 H1TF2 TRANSFAC yes 70345101
chr6 30796267 30796271 NFE TRANSFAC yes 70345102
chr6 30796267 30796271 SRF TRANSFAC yes 70345103
chr6 30796267 30796271 H1TF2 TRANSFAC yes 101056117
chr6 30796267 30796271 NFE TRANSFAC yes 101056118
chr6 30796267 30796271 SRF TRANSFAC yes 101056119
chr6 30796271 30796284 ELF1 JASPAR yes 70345104
chr6 30796271 30796284 ELF1 JASPAR yes 101056120
chr6 30796271 30796286 STAT1 JASPAR yes 70345105
chr6 30796271 30796286 STAT1 JASPAR yes 101056121
chr6 30796273 30796284 STAT1 JASPAR yes 70345106
chr6 30796273 30796284 STAT3 JASPAR yes 70345107
chr6 30796273 30796284 STAT1 JASPAR yes 101056122
chr6 30796273 30796284 STAT3 JASPAR yes 101056123
chr6 30796291 30796295 YY1 TRANSFAC yes 70345108
chr6 30796291 30796295 YY1 TRANSFAC yes 101056124
chr6 30796314 30796325 CDX2 JASPAR yes 70345109
chr6 30796314 30796325 CDX2 JASPAR yes 101056125
chr6 30796315 30796326 HOXA10 JASPAR yes 70345110
chr6 30796315 30796326 HOXC11 JASPAR yes 70345111
chr6 30796315 30796326 HOXC12 JASPAR yes 70345112
chr6 30796315 30796326 HOXD12 JASPAR yes 70345113
chr6 30796315 30796326 HOXA10 JASPAR yes 101056126
chr6 30796315 30796326 HOXC11 JASPAR yes 101056127
chr6 30796315 30796326 HOXC12 JASPAR yes 101056128
chr6 30796315 30796326 HOXD12 JASPAR yes 101056129
chr6 30796316 30796325 CDX1 JASPAR yes 70345114
chr6 30796316 30796325 CDX1 JASPAR yes 101056130
chr6 30796316 30796326 HOXC10 JASPAR yes 70345115
chr6 30796316 30796326 HOXD11 JASPAR yes 70345116
chr6 30796316 30796326 HOXC10 JASPAR yes 101056131
chr6 30796316 30796326 HOXD11 JASPAR yes 101056132
chr6 30796326 30796341 TFAP2A JASPAR yes 70345117
chr6 30796326 30796341 TFAP2C JASPAR yes 70345118
chr6 30796326 30796341 TFAP2A JASPAR yes 101056133
chr6 30796326 30796341 TFAP2C JASPAR yes 101056134
chr6 30796332 30796347 IRF9 JASPAR yes 70345119
chr6 30796332 30796347 IRF9 JASPAR yes 101056135
chr6 30796333 30796347 IRF7 JASPAR yes 70345120
chr6 30796333 30796347 IRF8 JASPAR yes 70345121
chr6 30796333 30796347 IRF7 JASPAR yes 101056136
chr6 30796333 30796347 IRF8 JASPAR yes 101056137
chr6 30796334 30796348 STAT1 JASPAR yes 70345122
chr6 30796334 30796348 STAT1 JASPAR yes 101056138
chr6 30796334 30796349 STAT2 JASPAR yes 70345123
chr6 30796334 30796349 STAT2 JASPAR yes 101056139
chr6 30796349 30796366 PAX1 JASPAR yes 70345124
chr6 30796349 30796366 PAX1 JASPAR yes 101056140
chr6 30796350 30796354 H1TF2 TRANSFAC yes 70345125
chr6 30796350 30796354 NFE TRANSFAC yes 70345126
chr6 30796350 30796354 SRF TRANSFAC yes 70345127
chr6 30796350 30796354 H1TF2 TRANSFAC yes 101056141
chr6 30796350 30796354 NFE TRANSFAC yes 101056142
chr6 30796350 30796354 SRF TRANSFAC yes 101056143
chr6 30796360 30796371 NFE2L2 JASPAR yes 70345128
chr6 30796360 30796371 NFE2L2 JASPAR yes 101056144
chr6 30796362 30796378 SOX8 JASPAR yes 70345129
chr6 30796362 30796378 SOX8 JASPAR yes 101056145
chr6 30796372 30796381 SRY JASPAR yes 70345130
chr6 30796372 30796381 SRY JASPAR yes 101056146
chr6 30796379 30796390 TFAP2A JASPAR yes 70345131
chr6 30796379 30796390 TFAP2B JASPAR yes 70345132
chr6 30796379 30796390 TFAP2C JASPAR yes 70345133
chr6 30796379 30796390 TFAP2A JASPAR yes 101056147
chr6 30796379 30796390 TFAP2B JASPAR yes 101056148
chr6 30796379 30796390 TFAP2C JASPAR yes 101056149
chr6 30796383 30796398 RUNX2 JASPAR yes 70345134
chr6 30796383 30796398 RUNX2 JASPAR yes 101056150
chr6 30796420 30796431 NFKB1 JASPAR yes 70345135
chr6 30796420 30796431 NFKB1 JASPAR yes 101056151
chr6 30796423 30796436 ZBTB18 JASPAR yes 70345136
chr6 30796423 30796436 ZBTB18 JASPAR yes 101056152
chr6 30796435 30796454 CTCF JASPAR yes 70345137
chr6 30796435 30796454 CTCF JASPAR yes 101056153
chr6 30796443 30796456 NFKB1 JASPAR yes 70345138
chr6 30796443 30796456 NFKB1 JASPAR yes 101056154
chr6 30796443 30796463 PPARG JASPAR yes 70345139
chr6 30796443 30796463 PPARG JASPAR yes 101056155
chr6 30796444 30796455 NFKB1 JASPAR yes 70345140
chr6 30796444 30796455 NFKB1 JASPAR yes 101056156
chr6 30796450 30796465 PRDM1 JASPAR yes 70345141
chr6 30796450 30796465 PRDM1 JASPAR yes 101056157
chr6 30796451 30796461 SP1 JASPAR yes 70345142
chr6 30796451 30796461 SP1 JASPAR yes 101056158
chr6 30796456 30796462 MZF1 JASPAR yes 70345143
chr6 30796456 30796462 MZF1 JASPAR yes 101056159
chr6 30796472 30796478 ZNF354C JASPAR yes 70345144
chr6 30796472 30796478 ZNF354C JASPAR yes 101056160
chr6 30796483 30796494 STAT3 JASPAR yes 70345145
chr6 30796483 30796494 STAT3 JASPAR yes 101056161
chr6 30796484 30796499 HSF1 JASPAR yes 70345146
chr6 30796484 30796499 HSF1 JASPAR yes 101056162
chr6 30796485 30796498 HSF1 JASPAR yes 70345147
chr6 30796485 30796498 HSF2 JASPAR yes 70345148
chr6 30796485 30796498 HSF4 JASPAR yes 70345149
chr6 30796485 30796498 HSF1 JASPAR yes 101056163
chr6 30796485 30796498 HSF2 JASPAR yes 101056164
chr6 30796485 30796498 HSF4 JASPAR yes 101056165
chr6 30796490 30796502 FOXI1 JASPAR yes 70345150
chr6 30796490 30796502 FOXI1 JASPAR yes 101056166
chr6 30796493 30796497 YY1 TRANSFAC yes 70345151
chr6 30796493 30796497 YY1 TRANSFAC yes 101056167
chr6 30796506 30796517 NFE2L2 JASPAR yes 70345152
chr6 30796506 30796517 NFE2L2 JASPAR yes 101056168
chr6 30796514 30796527 ZBTB18 JASPAR yes 70345153
chr6 30796514 30796527 ZBTB18 JASPAR yes 101056169
chr6 30796520 30796534 RORA JASPAR yes 70345154
chr6 30796520 30796534 RORA JASPAR yes 101056170
chr6 30796521 30796532 PHOX2A JASPAR yes 70345155
chr6 30796521 30796532 PHOX2A JASPAR yes 101056171
chr6 30796525 30796539 POU1F1 JASPAR yes 70345156
chr6 30796525 30796539 POU1F1 JASPAR yes 101056172
chr6 30796545 30796566 MAFG JASPAR yes 70345157
chr6 30796545 30796566 MAFG JASPAR yes 101056173
chr6 30796546 30796560 JUN JASPAR yes 70345158
chr6 30796546 30796560 JUN JASPAR yes 101056174
chr6 30796548 30796559 BATF JASPAR yes 70345159
chr6 30796548 30796559 BATF JASPAR yes 101056175
chr6 30796549 30796560 FOSL2 JASPAR yes 70345160
chr6 30796549 30796560 JUNB JASPAR yes 70345161
chr6 30796549 30796560 FOSL2 JASPAR yes 101056176
chr6 30796549 30796560 JUNB JASPAR yes 101056177
chr6 30796550 30796561 FOS JASPAR yes 70345162
chr6 30796550 30796561 FOSL1 JASPAR yes 70345163
chr6 30796550 30796561 JUND JASPAR yes 70345164
chr6 30796550 30796561 NFE2 JASPAR yes 70345165
chr6 30796550 30796561 FOS JASPAR yes 101056178
chr6 30796550 30796561 FOSL1 JASPAR yes 101056179
chr6 30796550 30796561 JUND JASPAR yes 101056180
chr6 30796550 30796561 NFE2 JASPAR yes 101056181
chr6 30796550 30796568 MAFF JASPAR yes 70345166
chr6 30796550 30796568 MAFF JASPAR yes 101056182
chr6 30796551 30796560 JDP2 JASPAR yes 70345167
chr6 30796551 30796560 JDP2 JASPAR yes 101056183
chr6 30796551 30796562 JUNB JASPAR yes 70345168
chr6 30796551 30796562 NFE2L2 JASPAR yes 70345169
chr6 30796551 30796562 JUNB JASPAR yes 101056184
chr6 30796551 30796562 NFE2L2 JASPAR yes 101056185
chr6 30796551 30796565 JUN JASPAR yes 70345170
chr6 30796551 30796565 JUN JASPAR yes 101056186
chr6 30796552 30796563 BATF JASPAR yes 70345171
chr6 30796552 30796563 BATF JASPAR yes 101056187
chr6 30796557 30796572 PRDM1 JASPAR yes 70345172
chr6 30796557 30796572 PRDM1 JASPAR yes 101056188
SNP sites on vista51552[chr6:30796195-30796565]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 30796200 rs187373645 G A,C no 8950076
chr6 30796205 rs116395626 A T no 8950077
chr6 30796271 rs9380199 A G
CTCF ELF1 H1TF2 MAFF MAFK NFE SRF STAT1
8950078
chr6 30796365 rs114101352 C T
CTCF MAFF MAFK NFE2L2 PAX1 RAD21 SMC3 SOX8
8950079
chr6 30796384 rs12197221 T C
CTCF MAFF MAFK RAD21 RUNX2 SMC3 TFAP2A TFAP2B TFAP2C
8950080
chr6 30796545 rs1264350 T C
CTCF MAFF MAFG MAFK RAD21 SMC3
8950081
Genes possibly regulated by vista51552[chr6:30796195-30796565]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30695486 30710510 - FLOT1 ENSG00000137312.10 30710510 0.61 0.86 6351 14315
chr6 30710976 30712331 - IER3 ENSG00000137331.11 30712331 0.82 0.96 6352 16136
chr6 30844198 30867933 + DDR1 ENSG00000204580.7 30844198 0.83 0.82 6353 52367
chr6 30875961 30881883 + GTF2H4 ENSG00000213780.6 30875961 0.64 0.83 6354 20604
chr6 30876019 30894236 + VARS2 ENSG00000137411.12 30876019 0.64 0.72 6355 20546
Expression level of Genes
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miRNAs possibly regulated by vista51552[chr6:30796195-30796565]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results