EnhancerDB
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  3. rs9380199[chr6:30796271]
Enhancers that have rs9380199[chr6:30796271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 30796195 30796565 vista51552
VISTA
Transcript factors that have rs9380199[chr6:30796271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30796232 30796652 CTCF UCSC Txn Factor no Conserved 108539557
chr6 30796237 30796713 MAFK UCSC Txn Factor no Conserved 108539558
chr6 30796256 30796592 MAFF UCSC Txn Factor no Conserved 108539559
chr6 30796267 30796271 H1TF2 TRANSFAC yes 70345101
chr6 30796267 30796271 NFE TRANSFAC yes 70345102
chr6 30796267 30796271 SRF TRANSFAC yes 70345103
chr6 30796267 30796271 H1TF2 TRANSFAC yes 101056117
chr6 30796267 30796271 NFE TRANSFAC yes 101056118
chr6 30796267 30796271 SRF TRANSFAC yes 101056119
chr6 30796271 30796284 ELF1 JASPAR yes 70345104
chr6 30796271 30796284 ELF1 JASPAR yes 101056120
chr6 30796271 30796286 STAT1 JASPAR yes 70345105
chr6 30796271 30796286 STAT1 JASPAR yes 101056121
Genes associated with rs9380199[chr6:30796271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More