EnhancerDB
  1. Home
  2. SNP
  3. rs12197221[chr6:30796384]
Enhancers that have rs12197221[chr6:30796384]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 30796195 30796565 vista51552
VISTA
Transcript factors that have rs12197221[chr6:30796384]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30796232 30796652 CTCF UCSC Txn Factor no Conserved 108539557
chr6 30796237 30796713 MAFK UCSC Txn Factor no Conserved 108539558
chr6 30796256 30796592 MAFF UCSC Txn Factor no Conserved 108539559
chr6 30796311 30796581 SMC3 UCSC Txn Factor no Conserved 108539560
chr6 30796316 30796581 RAD21 UCSC Txn Factor no Conserved 108539561
chr6 30796379 30796390 TFAP2A JASPAR yes 70345131
chr6 30796379 30796390 TFAP2B JASPAR yes 70345132
chr6 30796379 30796390 TFAP2C JASPAR yes 70345133
chr6 30796379 30796390 TFAP2A JASPAR yes 101056147
chr6 30796379 30796390 TFAP2B JASPAR yes 101056148
chr6 30796379 30796390 TFAP2C JASPAR yes 101056149
chr6 30796383 30796398 RUNX2 JASPAR yes 70345134
chr6 30796383 30796398 RUNX2 JASPAR yes 101056150
Genes associated with rs12197221[chr6:30796384], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More