EnhancerDB
  1. Home
  2. Enhancers
  3. vista5380[chr1:226878935-226879345]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5380[chr1:226878935-226879345]
Back to top
Tissue distribution of vista5380
Back to top
Transcription factor that possibly regulate vista5380[chr1:226878935-226879345]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226878933 226878937 YY1 TRANSFAC yes 35833608
chr1 226878933 226878937 YY1 TRANSFAC yes 118472395
chr1 226878935 226878950 FOXP1 JASPAR yes 35833609
chr1 226878935 226878950 FOXP1 JASPAR yes 118472396
chr1 226878936 226878951 FOXP1 JASPAR yes 35833610
chr1 226878936 226878951 FOXP1 JASPAR yes 118472397
chr1 226878937 226878943 TBP TRANSFAC yes 35833611
chr1 226878937 226878943 TBP TRANSFAC yes 118472398
chr1 226878937 226878952 FOXP1 JASPAR yes 35833612
chr1 226878937 226878952 FOXP1 JASPAR yes 118472399
chr1 226878940 226878955 STAT2 JASPAR yes 35833613
chr1 226878940 226878955 STAT2 JASPAR yes 118472400
chr1 226878952 226878967 FOXP1 JASPAR yes 35833614
chr1 226878952 226878967 FOXP1 JASPAR yes 118472401
chr1 226878953 226878964 FOXP2 JASPAR yes 35833615
chr1 226878953 226878964 FOXP2 JASPAR yes 118472402
chr1 226878954 226878969 FOXP1 JASPAR yes 35833616
chr1 226878954 226878969 FOXP1 JASPAR yes 118472403
chr1 226878958 226878972 IRF7 JASPAR yes 35833617
chr1 226878958 226878972 IRF7 JASPAR yes 118472404
chr1 226878982 226878986 TEAD2 TRANSFAC yes 35833618
chr1 226878982 226878986 TEAD2 TRANSFAC yes 118472405
chr1 226879008 226879012 LFA1 TRANSFAC yes 35833619
chr1 226879008 226879012 LFA1 TRANSFAC yes 118472406
chr1 226879008 226879018 MAX JASPAR yes 35833620
chr1 226879008 226879018 MAX JASPAR yes 118472407
chr1 226879012 226879025 POU2F2 JASPAR yes 35833621
chr1 226879012 226879025 POU2F2 JASPAR yes 118472408
chr1 226879050 226879060 SREBF1 JASPAR yes 35833622
chr1 226879050 226879060 SREBF2 JASPAR yes 35833623
chr1 226879050 226879060 SREBF1 JASPAR yes 118472409
chr1 226879050 226879060 SREBF2 JASPAR yes 118472410
chr1 226879053 226879066 TFAP2B JASPAR yes 35833624
chr1 226879053 226879066 TFAP2B JASPAR yes 118472411
chr1 226879095 226879100 SP1 TRANSFAC yes 35833625
chr1 226879095 226879100 SP1 TRANSFAC yes 118472412
chr1 226879098 226879103 SP1 TRANSFAC yes 35833626
chr1 226879098 226879103 SP1 TRANSFAC yes 118472413
chr1 226879104 226879116 TFAP2A JASPAR yes 35833627
chr1 226879104 226879116 TFAP2B JASPAR yes 35833628
chr1 226879104 226879116 TFAP2A JASPAR yes 118472414
chr1 226879104 226879116 TFAP2B JASPAR yes 118472415
chr1 226879149 226879161 INSM1 JASPAR yes 35833629
chr1 226879149 226879161 INSM1 JASPAR yes 118472416
chr1 226879156 226879167 NFKB1 JASPAR yes 35833630
chr1 226879156 226879167 NFKB1 JASPAR yes 118472417
chr1 226879157 226879167 NFKB1 JASPAR yes 35833631
chr1 226879157 226879167 REL JASPAR yes 35833632
chr1 226879157 226879167 NFKB1 JASPAR yes 118472418
chr1 226879157 226879167 REL JASPAR yes 118472419
chr1 226879178 226879190 PROX1 JASPAR yes 35833633
chr1 226879178 226879190 PROX1 JASPAR yes 118472420
chr1 226879196 226879207 FOSL1 JASPAR yes 35833634
chr1 226879196 226879207 FOSL1 JASPAR yes 118472421
chr1 226879197 226879208 FOSL2 JASPAR yes 35833635
chr1 226879197 226879208 FOXA1 JASPAR yes 35833636
chr1 226879197 226879208 FOSL2 JASPAR yes 118472422
chr1 226879197 226879208 FOXA1 JASPAR yes 118472423
chr1 226879197 226879212 FOXA1 JASPAR yes 35833637
chr1 226879197 226879212 FOXA1 JASPAR yes 118472424
chr1 226879202 226879221 REST JASPAR yes 35833638
chr1 226879202 226879221 REST JASPAR yes 118472425
chr1 226879208 226879219 FLI1 JASPAR yes 35833639
chr1 226879208 226879219 FLI1 JASPAR yes 118472426
chr1 226879209 226879217 EHF JASPAR yes 35833640
chr1 226879209 226879217 EHF JASPAR yes 118472427
chr1 226879216 226879222 MAZ TRANSFAC yes 35833641
chr1 226879216 226879222 MAZ TRANSFAC yes 118472428
chr1 226879220 226879232 GLI2 JASPAR yes 35833642
chr1 226879220 226879232 GLI2 JASPAR yes 118472429
chr1 226879243 226879249 SP1 TRANSFAC yes 35833643
chr1 226879243 226879249 SP1 TRANSFAC yes 118472430
chr1 226879243 226879253 SP1 JASPAR yes 35833644
chr1 226879243 226879253 SP1 JASPAR yes 118472431
chr1 226879254 226879267 POU3F3 JASPAR yes 35833645
chr1 226879254 226879267 POU3F3 JASPAR yes 118472432
chr1 226879269 226879273 YY1 TRANSFAC yes 35833646
chr1 226879269 226879273 YY1 TRANSFAC yes 118472433
chr1 226879283 226879287 YY1 TRANSFAC yes 35833647
chr1 226879283 226879287 YY1 TRANSFAC yes 118472434
chr1 226879291 226879295 H1TF2 TRANSFAC yes 35833648
chr1 226879291 226879295 NFE TRANSFAC yes 35833649
chr1 226879291 226879295 SRF TRANSFAC yes 35833650
chr1 226879291 226879295 H1TF2 TRANSFAC yes 118472435
chr1 226879291 226879295 NFE TRANSFAC yes 118472436
chr1 226879291 226879295 SRF TRANSFAC yes 118472437
chr1 226879312 226879316 YY1 TRANSFAC yes 35833651
chr1 226879312 226879316 YY1 TRANSFAC yes 118472438
chr1 226879314 226879324 HOXB13 JASPAR yes 35833652
chr1 226879314 226879324 HOXD13 JASPAR yes 35833653
chr1 226879314 226879324 HOXB13 JASPAR yes 118472439
chr1 226879314 226879324 HOXD13 JASPAR yes 118472440
chr1 226879321 226879327 PEA3 TRANSFAC yes 35833654
chr1 226879321 226879327 PEA3 TRANSFAC yes 118472441
chr1 226879321 226879342 ZNF263 JASPAR yes 35833655
chr1 226879321 226879342 ZNF263 JASPAR yes 118472442
chr1 226879325 226879334 SOX9 JASPAR yes 35833656
chr1 226879325 226879334 SOX9 JASPAR yes 118472443
SNP sites on vista5380[chr1:226878935-226879345]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226879056 rs3820642 C T
SREBF1 SREBF2 TFAP2B
993904
chr1 226879181 rs145828941 G C
PROX1
993905
chr1 226879280 rs3754406 G A no 993906
chr1 226879309 rs143087470 A G no 993907
Genes possibly regulated by vista5380[chr1:226878935-226879345]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226819391 226927024 - ITPKB ENSG00000143772.5 226927024 0.8 0.99 1902 52321
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5380[chr1:226878935-226879345]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results