EnhancerDB
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  3. rs3754406[chr1:226879280]
Enhancers that have rs3754406[chr1:226879280]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 226878935 226879345 vista5380
VISTA
Transcript factors that have rs3754406[chr1:226879280]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226878969 226879405 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387212
chr1 226878969 226879405 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107876246
Genes associated with rs3754406[chr1:226879280], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More