EnhancerDB
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  3. vista53811[chr6:139300314-139300341]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53811[chr6:139300314-139300341]
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Tissue distribution of vista53811
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Transcription factor that possibly regulate vista53811[chr6:139300314-139300341]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 139300314 139300329 FOXP1 JASPAR yes 70449738
chr6 139300314 139300329 FOXP1 JASPAR yes 105758369
chr6 139300315 139300330 FOXP1 JASPAR yes 70449739
chr6 139300315 139300330 FOXP1 JASPAR yes 105758370
chr6 139300316 139300331 FOXP1 JASPAR yes 70449740
chr6 139300316 139300331 FOXP1 JASPAR yes 105758371
chr6 139300317 139300332 FOXP1 JASPAR yes 70449741
chr6 139300317 139300332 FOXP1 JASPAR yes 105758372
chr6 139300317 139300338 IRF1 JASPAR yes 70449742
chr6 139300317 139300338 IRF1 JASPAR yes 105758373
chr6 139300318 139300333 FOXP1 JASPAR yes 70449743
chr6 139300318 139300333 FOXP1 JASPAR yes 105758374
chr6 139300318 139300339 IRF1 JASPAR yes 70449744
chr6 139300318 139300339 IRF1 JASPAR yes 105758375
chr6 139300319 139300334 FOXP1 JASPAR yes 70449745
chr6 139300319 139300334 FOXP1 JASPAR yes 105758376
chr6 139300319 139300340 IRF1 JASPAR yes 70449746
chr6 139300319 139300340 IRF1 JASPAR yes 105758377
chr6 139300320 139300335 FOXP1 JASPAR yes 70449747
chr6 139300320 139300335 FOXP1 JASPAR yes 105758378
chr6 139300322 139300337 FOXP1 JASPAR yes 70449748
chr6 139300322 139300337 FOXP1 JASPAR yes 105758379
chr6 139300323 139300338 STAT2 JASPAR yes 70449749
chr6 139300323 139300338 STAT2 JASPAR yes 105758380
chr6 139300324 139300339 FOXP1 JASPAR yes 70449750
chr6 139300324 139300339 FOXP1 JASPAR yes 105758381
chr6 139300324 139300345 IRF1 JASPAR yes 70449751
chr6 139300324 139300345 IRF1 JASPAR yes 105758382
chr6 139300325 139300346 IRF1 JASPAR yes 70449752
chr6 139300325 139300346 IRF1 JASPAR yes 105758383
chr6 139300326 139300338 FOXC2 JASPAR yes 70449753
chr6 139300326 139300338 FOXC2 JASPAR yes 105758384
chr6 139300326 139300346 RREB1 JASPAR yes 70449754
chr6 139300326 139300346 RREB1 JASPAR yes 105758385
chr6 139300327 139300338 FOXP2 JASPAR yes 70449755
chr6 139300327 139300338 FOXP2 JASPAR yes 105758386
chr6 139300329 139300344 FOXP1 JASPAR yes 70449756
chr6 139300329 139300344 FOXP1 JASPAR yes 105758387
chr6 139300331 139300346 FOXP1 JASPAR yes 70449757
chr6 139300331 139300346 FOXP1 JASPAR yes 105758388
chr6 139300331 139300351 RREB1 JASPAR yes 70449758
chr6 139300331 139300351 RREB1 JASPAR yes 105758389
chr6 139300331 139300352 IRF1 JASPAR yes 70449759
chr6 139300331 139300352 IRF1 JASPAR yes 105758390
chr6 139300332 139300347 FOXP1 JASPAR yes 70449760
chr6 139300332 139300347 FOXP1 JASPAR yes 105758391
chr6 139300332 139300353 IRF1 JASPAR yes 70449761
chr6 139300332 139300353 IRF1 JASPAR yes 105758392
chr6 139300333 139300348 FOXP1 JASPAR yes 70449762
chr6 139300333 139300348 FOXP1 JASPAR yes 105758393
chr6 139300336 139300350 STAT1 JASPAR yes 70449763
chr6 139300336 139300350 STAT1 JASPAR yes 105758394
chr6 139300336 139300351 STAT2 JASPAR yes 70449764
chr6 139300336 139300351 STAT2 JASPAR yes 105758395
SNP sites on vista53811[chr6:139300314-139300341]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 139300328 rs563102182 A C
FOXC2 FOXP1 FOXP2 IRF1 RREB1 STAT2
9380428
chr6 139300330 rs533419999 A C
FOXC2 FOXP1 FOXP2 IRF1 RREB1 STAT2
9380429
chr6 139300335 rs66882901 C A
FOXC2 FOXP1 FOXP2 IRF1 RREB1 STAT2
9380430
chr6 139300339 rs570324544 A C
FOXP1 IRF1 RREB1 STAT1 STAT2
9380431
Genes possibly regulated by vista53811[chr6:139300314-139300341]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 139224630 139309398 - REPS1 ENSG00000135597.14 139309398 0.8 1.0 7000 90943
chr6 139349819 139364439 + ABRACL ENSG00000146386.7 139349819 0.88 0.99 7001 50522
Expression level of Genes
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miRNAs possibly regulated by vista53811[chr6:139300314-139300341]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results